RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 PRTN3P24158 256 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 GNG4P50150 75 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 TEX45Q8NA69 505 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 DNAJC4Q9NNZ3 241 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 LOC105371267A0A1B0GV96 52 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 C15orf65H3BRN8 121 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 COL8A1P27658 744 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 NPCDR1Q9BY65 106 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 YAE1D1Q9NRH1 226 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 WNT10AQ9GZT5 417 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 CLN5O75503 358 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 LHBP01229 141 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 IGFBP2P18065 325 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 ZFP82Q8N141 532 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 BCL2P10415 239 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 MYOD1P15172 320 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 PRCDQ00LT1 54 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 NCOR1P1Q9H4R4 102 aa11.83□□□□□ -0.52
PDLIM2-201ENST00000265810 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 RRHO14718 337 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 PAX6P26367 422 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 CTSZQ9UBR2 303 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 ZNF134P52741 427 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 GAMTQ14353 236 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 DOCK11Q5JSL3 2073 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 NDUFS8O00217 210 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 ATP5G2Q06055 141 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
PDLIM2-201ENST00000265810 FAM90A9PA6NNJ1 464 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 RNF223E7ERA6 249 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 IL6RP08887 468 aaPredicted RBP11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 AURKAIP1Q9NWT8 199 aaPredicted RBP11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 ZFYVE26Q68DK2 2539 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 HAX1O00165 279 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 ITGB1BP1O14713 200 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 TRGV3P03979 118 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 TPPP2P59282 170 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 OR5I1Q13606 314 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 CYB561D1Q8N8Q1 229 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 JKAMPQ9P055 326 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 SLC25A16P16260 332 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 MINOS1Q5TGZ0 78 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 CENPVQ7Z7K6 275 aaPredicted RBP11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 STPG2Q8N412 459 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 SEC11CQ9BY50 192 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 MINOS1-NBL1R4GNA1 71 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 TRAV30A0A087WSZ9 112 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 PQLC2Q6ZP29 291 aa11.81□□□□□ -0.52
PDLIM2-201ENST00000265810 BPTFQ12830 3046 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 RELBQ01201 579 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 PRSS8Q16651 343 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 RCC1LQ96I51 464 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 NAV2Q8IVL1 2488 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 ARL14EPLP0DKL9 152 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 C8orf88P0DMB2 117 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 MAS1LP35410 378 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 RPL35P42766 123 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 ARL16Q0P5N6 197 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 AWAT1Q58HT5 328 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 CYP2G1PQ6ZSU1 146 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 NPFFO15130 113 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 IL4P05112 153 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 OR52E5Q8NH55 327 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 CACNG8Q8WXS5 425 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 RARRES2Q99969 163 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 NAT8Q9UHE5 227 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 LINC00527Q9UJ94 153 aa11.8□□□□□ -0.52
PDLIM2-201ENST00000265810 HELTA6NFD8 242 aa11.79□□□□□ -0.52
PDLIM2-201ENST00000265810 MEF2BQ02080 365 aaPredicted RBP11.79□□□□□ -0.52
PDLIM2-201ENST00000265810 H3BTX0 84 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms