RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 IL15RAQ13261 267 aa13.89□□□□□ -0.19
SCAP-201ENST00000265565 FAM216BQ8N7L0 139 aa13.89□□□□□ -0.19
SCAP-201ENST00000265565 IGHV2-5P01817 119 aa13.88□□□□□ -0.19
SCAP-201ENST00000265565 NCOA6Q14686 2063 aaPredicted RBP13.88□□□□□ -0.19
SCAP-201ENST00000265565 CA1P00915 261 aaPredicted RBP13.88□□□□□ -0.19
SCAP-201ENST00000265565 GZMBP10144 247 aa13.88□□□□□ -0.19
SCAP-201ENST00000265565 SNRNP40Q96DI7 357 aaKnown RBP13.88□□□□□ -0.19
SCAP-201ENST00000265565 EAF1Q96JC9 268 aaPredicted RBP13.88□□□□□ -0.19
SCAP-201ENST00000265565 K7ERU9 68 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.196e-7■■■■■ 41.9
SCAP-201ENST00000265565 SNAI2O43623 268 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 FOXF2Q12947 444 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 TMEM14EPQ6UXP3 125 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■□□ 15.3
SCAP-201ENST00000265565 PCNTO95613 3336 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 AHRRA9YTQ3 701 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 IGHV2-70P01814 119 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 TMEM116Q8NCL8 245 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 TMUB1Q9BVT8 246 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 EFNB3Q15768 340 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 GOLT1AQ6ZVE7 132 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 LINC00305Q7Z4B0 112 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 FDCSPQ8NFU4 85 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 RAB37Q96AX2 223 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 KCNS1Q96KK3 526 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 SSBP4Q9BWG4 385 aaPredicted RBP13.87□□□□□ -0.19
SCAP-201ENST00000265565 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
SCAP-201ENST00000265565 A6NDN8 102 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 IQCF6A8MYZ5 107 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 M0R296 226 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 CA7P43166 264 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 COMPP49747 757 aaPredicted RBP13.86□□□□□ -0.19
SCAP-201ENST00000265565 WDR82Q6UXN9 313 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 C12orf54Q6X4T0 127 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 HILPDAQ9Y5L2 63 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 DUTP33316 252 aaKnown RBP13.86□□□□□ -0.19
SCAP-201ENST00000265565 TIMP3P35625 211 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 TREML4Q6UXN2 200 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 C1orf174Q8IYL3 243 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 OR4C13Q8NGP0 309 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 GAGE10A6NGK3 116 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 BTF3P20290 206 aaKnown RBP13.86□□□□□ -0.19
SCAP-201ENST00000265565 PRR31Q5SQ13 230 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 C19orf24Q9BVV8 132 aa13.86□□□□□ -0.19
SCAP-201ENST00000265565 IGKV3-7A0A075B6H7 116 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 NBEAP1P0C6P0 100 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 CEACAM3P40198 252 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 TMEM70Q9BUB7 260 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 SCNM1Q9BWG6 230 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 A0A1B0GUS0 222 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 CD3EP07766 207 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 MC5RP33032 325 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 MORN2Q502X0 79 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 TMEM97Q5BJF2 176 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 SPATA31B1PQ5VZV4 182 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 ASCL4Q6XD76 172 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 NUDT3O95989 172 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 PAX9P55771 341 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 TBR1Q16650 682 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 LAMTOR2Q9Y2Q5 125 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
SCAP-201ENST00000265565 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
SCAP-201ENST00000265565 ACSF3Q4G176 576 aaPredicted RBP13.85□□□□□ -0.19
SCAP-201ENST00000265565 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 MRPS18CQ9Y3D5 142 aaKnown RBP13.84□□□□□ -0.19
SCAP-201ENST00000265565 LNP1A1A4G5 178 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 FCGR2BP31994 310 aaPredicted RBP13.84□□□□□ -0.19
SCAP-201ENST00000265565 ZNF585BQ52M93 769 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 PRDM13Q9H4Q3 707 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 SEPSECSQ9HD40 501 aaKnown RBP13.84□□□□□ -0.19
SCAP-201ENST00000265565 IGKV3D-15A0A087WSY6 115 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 IGHV2OR16-5A0A0B4J2B6 119 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 IGHV3-35A0A0C4DH35 117 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 HLA-DRB1P01911 266 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 SELLP14151 372 aa13.84□□□□□ -0.19
SCAP-201ENST00000265565 ZFP36L1Q07352 338 aaKnown RBP13.84□□□□□ -0.19
SCAP-201ENST00000265565 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCAP-201ENST00000265565 OR4C46A6NHA9 309 aa13.83□□□□□ -0.19
SCAP-201ENST00000265565 HBBP68871 147 aa13.83□□□□□ -0.19
SCAP-201ENST00000265565 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.19
SCAP-201ENST00000265565 PEX7O00628 323 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 PYYP10082 97 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 ANOS1P23352 680 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 WDR31Q8NA23 367 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 MRPL32Q9BYC8 188 aaKnown RBP13.83□□□□□ -0.2
SCAP-201ENST00000265565 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 FREM1Q5H8C1 2179 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 CKS2P33552 79 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 GFRA1P56159 465 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 SEMA5BQ9P283 1151 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 SAA2-SAA4A0A096LPE2 208 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 KBTBD11-OT1A0A1B0GTJ5 212 aa13.83□□□□□ -0.2
SCAP-201ENST00000265565 TMEM189A5PLL7 270 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms