RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RNF222A6NCQ9 220 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 IZUMO1RA6ND01 250 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 SERF1AO75920 110 aa15.16■□□□□ 0.02
COL5A3-201ENST00000264828 ATP5LO75964 103 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 HIGD1CA8MV81 97 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 TMEM106BQ9NUM4 274 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 FER1L6-AS1Q8NA97 138 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 A8MXK9 166 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 FAM27E3Q08E93 113 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 TMEM30BQ3MIR4 351 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 FNDC4Q9H6D8 234 aaPredicted RBP15.15■□□□□ 0.02
COL5A3-201ENST00000264828 GLMPQ8WWB7 406 aa15.15■□□□□ 0.02
COL5A3-201ENST00000264828 F5P12259 2224 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 LINC00587B1AMM8 73 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 CLDN16Q9Y5I7 305 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 TRBV7-9A0A0J9YWB2 115 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 SAA1P0DJI8 122 aaPredicted RBP15.14■□□□□ 0.01
COL5A3-201ENST00000264828 H7C1H1 209 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 IGLV3-21P80748 117 aaPredicted RBP15.14■□□□□ 0.01
COL5A3-201ENST00000264828 Q6ZT83 130 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 SPSB2Q99619 263 aa15.14■□□□□ 0.01
COL5A3-201ENST00000264828 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
COL5A3-201ENST00000264828 A0A0G2JMM0 328 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 A0A1W2PPB8 328 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 A0A1W2PRS3 328 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 KIR3DP1A8MWS1 328 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 B9A039 149 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 CECR9P0C854 216 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 RPL23P62829 140 aaKnown RBP15.13■□□□□ 0.01
COL5A3-201ENST00000264828 PPP1R27Q86WC6 154 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 REPIN1Q9BWE0 567 aaKnown RBP15.13■□□□□ 0.01
COL5A3-201ENST00000264828 STAG3L3P0CL85 134 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 CCDC88CQ9P219 2028 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 ZNF525Q8N782 197 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 C19orf48Q6RUI8 117 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 FDCSPQ8NFU4 85 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 C1QTNF9P0C862 333 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 ARPC1AQ92747 370 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
COL5A3-201ENST00000264828 TMEM50AO95807 157 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 TFF1P04155 84 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 IFI6P09912 130 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 A0A1W2PRX2 142 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 OSR1Q8TAX0 266 aaPredicted RBP15.12■□□□□ 0.01
COL5A3-201ENST00000264828 NRN1Q9NPD7 142 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 CHCHD2Q9Y6H1 151 aaPredicted RBP15.12■□□□□ 0.01
COL5A3-201ENST00000264828 A0A1W2PR77 199 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 H3BRM9 83 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 C21orf62Q9NYP8 219 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.12■□□□□ 0.01
COL5A3-201ENST00000264828 CELA3BP08861 270 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 UCP1P25874 307 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 APOBEC3AP31941 199 aaPredicted RBP15.12■□□□□ 0.01
COL5A3-201ENST00000264828 ORMDL3Q8N138 153 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 LINC01587Q99440 93 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 PATJQ8NI35 1801 aa15.12■□□□□ 0.01
COL5A3-201ENST00000264828 A0A087WWC5 75 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 TRAV8-2A0A0B4J237 113 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 FOXH1O75593 365 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 HTN3P15516 51 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 PPP1R32Q7Z5V6 425 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 PGPEP1LA6NFU8 196 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 IGHV3-11P01762 117 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 OR10J3Q5JRS4 329 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 SAMD13Q5VXD3 122 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 ZNF703Q9H7S9 590 aaPredicted RBP15.11■□□□□ 0.01
COL5A3-201ENST00000264828 TUBA4BQ9H853 241 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 CNTFRP26992 372 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 ZNF837Q96EG3 531 aaPredicted RBP15.11■□□□□ 0.01
COL5A3-201ENST00000264828 MEGF9Q9H1U4 602 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 TDGF1P13385 188 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 MBD3L1Q8WWY6 194 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 C18orf12Q96KH6 178 aa15.11■□□□□ 0.01
COL5A3-201ENST00000264828 NPFFR1Q9GZQ6 430 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 NHP2Q9NX24 153 aaKnown RBP15.1■□□□□ 0.01
COL5A3-201ENST00000264828 ZNF236Q9UL36 1845 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 KBTBD11-OT1A0A1B0GTJ5 212 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 CD55P08174 381 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 ATP5IP56385 69 aaPredicted RBP15.1■□□□□ 0.01
COL5A3-201ENST00000264828 RIPPLY3P57055 190 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 ELOVL5Q9NYP7 299 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 SPAG8Q99932 426 aaPredicted RBP15.1■□□□□ 0.01
COL5A3-201ENST00000264828 LAMTOR2Q9Y2Q5 125 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 BSPH1Q075Z2 132 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 PLPPR1Q8TBJ4 325 aa15.1■□□□□ 0.01
COL5A3-201ENST00000264828 A0A087WV48 116 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 DPM3Q9P2X0 92 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 EVI2AP22794 236 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 NUTF2P61970 127 aaKnown RBP15.09■□□□□ 0.01
COL5A3-201ENST00000264828 PRDM13Q9H4Q3 707 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 TGFBR3LH3BV60 316 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 C1QL4Q86Z23 238 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 CKAP5Q14008 2032 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 LHFPL4Q7Z7J7 247 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 JMJD8Q96S16 334 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 PIKFYVEQ9Y2I7 2098 aa15.09■□□□□ 0.01
COL5A3-201ENST00000264828 CASP8AP2Q9UKL3 1982 aa15.08■□□□□ 0.01
COL5A3-201ENST00000264828 CIARTQ8N365 385 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms