RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 CLEC7AQ9BXN2 247 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 MGST3O14880 152 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 APOHP02749 345 aaPredicted RBP12.65□□□□□ -0.38
CASC3-201ENST00000264645 SPATA31B1PQ5VZV4 182 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 TCFL5Q9UL49 500 aa12.65□□□□□ -0.38
CASC3-201ENST00000264645 A0A087X0K7 114 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 CKS2P33552 79 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 SELENOTP62341 195 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 ZNF441Q8N8Z8 693 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
CASC3-201ENST00000264645 TDGF1P13385 188 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 CDX2Q99626 313 aaPredicted RBP12.64□□□□□ -0.39
CASC3-201ENST00000264645 MCRIP2Q9BUT9 160 aaKnown RBP12.64□□□□□ -0.39
CASC3-201ENST00000264645 SEPSECSQ9HD40 501 aaKnown RBP12.64□□□□□ -0.39
CASC3-201ENST00000264645 TYMSP04818 313 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 SLC25A53Q5H9E4 307 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 TMEM136Q6ZRR5 245 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 BRWD3Q6RI45 1802 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
CASC3-201ENST00000264645 MUC21Q5SSG8 566 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 TREML4Q6UXN2 200 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 JKAMPQ9P055 326 aa12.64□□□□□ -0.39
CASC3-201ENST00000264645 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 RPL7P18124 248 aaKnown RBP12.63□□□□□ -0.39
CASC3-201ENST00000264645 WFDC3Q8IUB2 231 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 RNF115Q9Y4L5 304 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 K7ESF4 209 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 ACP1P24666 158 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 S100A4P26447 101 aaKnown RBP12.63□□□□□ -0.39
CASC3-201ENST00000264645 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
CASC3-201ENST00000264645 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 ZPBPQ9BS86 351 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 GGTLC1Q9BX51 225 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 PEX7O00628 323 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 COA6Q5JTJ3 125 aaKnown RBP12.63□□□□□ -0.39
CASC3-201ENST00000264645 OR13A1Q8NGR1 328 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 PHF7Q9BWX1 381 aaPredicted RBP12.63□□□□□ -0.39
CASC3-201ENST00000264645 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 TNFRSF19Q9NS68 423 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 NOTCH3Q9UM47 2321 aa12.63□□□□□ -0.39
CASC3-201ENST00000264645 KIR2DL5BA0A0G2JN68 375 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 KIR2DL5BA0A0G2JPC4 375 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 A0A1W2PS18 150 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 ZNF785A8K8V0 405 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
CASC3-201ENST00000264645 KIR2DL5AQ8N109 375 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 IGHV1-45A0A0A0MS14 117 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 TNFAIP6P98066 277 aaPredicted RBP12.62□□□□□ -0.39
CASC3-201ENST00000264645 ZNF114Q8NC26 417 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
CASC3-201ENST00000264645 OR2T8A6NH00 312 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 NUPR1O60356 82 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 TFF1P04155 84 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 RPL30P62888 115 aaKnown RBP12.62□□□□□ -0.39
CASC3-201ENST00000264645 SSPNQ14714 243 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 ZNF414Q96IQ9 312 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
CASC3-201ENST00000264645 CD40P25942 277 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 CLDN18P56856 261 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 PCOLCEQ15113 449 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 GOLT1AQ6ZVE7 132 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 HIST1H4GQ99525 98 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 RASL11BQ9BPW5 248 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 PSMB2P49721 201 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 TSKUQ8WUA8 353 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 SLC25A33Q9BSK2 321 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 IGKV1-6A0A0C4DH72 117 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 LINC00205P59089 165 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
CASC3-201ENST00000264645 TWIST1Q15672 202 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 ZIC4Q8N9L1 334 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 CCL17Q92583 94 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 SNRNP40Q96DI7 357 aaKnown RBP12.61□□□□□ -0.39
CASC3-201ENST00000264645 C19orf24Q9BVV8 132 aa12.61□□□□□ -0.39
CASC3-201ENST00000264645 A0A1W2PRE2 83 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 NDUFB3O43676 98 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 OR9G9P0C7N8 305 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 CX3CL1P78423 397 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 WFDC8Q8IUA0 241 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
CASC3-201ENST00000264645 SPTAN1Q13813 2472 aaKnown RBP12.6□□□□□ -0.39
CASC3-201ENST00000264645 TRIOBPQ9H2D6 2365 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 PRR19A6NJB7 356 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 DLL1O00548 723 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 FOXH1O75593 365 aa12.6□□□□□ -0.39
CASC3-201ENST00000264645 MOSP00540 346 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms