RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 SCGB1C1Q8TD33 95 aa19■□□□□ 0.63
EPCAM-201ENST00000263735 RNF141Q8WVD5 230 aa19■□□□□ 0.63
EPCAM-201ENST00000263735 SVEP1Q4LDE5 3571 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 ZANQ9Y493 2812 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 UBE2L5PA0A1B0GUS4 154 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 NMBP08949 121 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 OR13C7P0DN81 318 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 SUB1P53999 127 aaKnown RBP eCLIP18.99■□□□□ 0.632e-7■■■■□ 24.7
EPCAM-201ENST00000263735 DLK1P80370 383 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 Q8N9W7 124 aa18.99■□□□□ 0.63
EPCAM-201ENST00000263735 WDR61Q9GZS3 305 aaKnown RBP18.99■□□□□ 0.63
EPCAM-201ENST00000263735 TEX22C9J3V5 150 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 CNIH1O95406 144 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 FSHBP01225 129 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 TUSC1Q2TAM9 212 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 ZNF114Q8NC26 417 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 SH3BGRL3Q9H299 93 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 CSMD1Q96PZ7 3565 aa18.98■□□□□ 0.63
EPCAM-201ENST00000263735 NANPQ8TBE9 248 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 SSX3Q99909 188 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 SULT1A2P50226 295 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 AANATQ16613 207 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 ZNF562Q6V9R5 426 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 CIARTQ8N365 385 aaPredicted RBP18.97■□□□□ 0.63
EPCAM-201ENST00000263735 PIFOQ8TCI5 191 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 PCNPQ8WW12 178 aaKnown RBP18.97■□□□□ 0.63
EPCAM-201ENST00000263735 CCDC168Q8NDH2 2452 aa18.97■□□□□ 0.63
EPCAM-201ENST00000263735 HECTD1Q9ULT8 2610 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 FGF16O43320 207 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 HLA-DRB1P01911 266 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 RUNX1Q01196 453 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 FXYD3Q14802 87 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 TAF15Q92804 592 aaKnown RBP eCLIP18.96■□□□□ 0.63
EPCAM-201ENST00000263735 P2RX4Q99571 388 aa18.96■□□□□ 0.63
EPCAM-201ENST00000263735 FNDC10F2Z333 226 aa18.95■□□□□ 0.62
EPCAM-201ENST00000263735 FAM157CP0CG43 387 aa18.95■□□□□ 0.62
EPCAM-201ENST00000263735 RASL11BQ9BPW5 248 aa18.95■□□□□ 0.62
EPCAM-201ENST00000263735 PSMG3Q9BT73 122 aaPredicted RBP18.95■□□□□ 0.62
EPCAM-201ENST00000263735 MDKP21741 143 aaPredicted RBP18.94■□□□□ 0.62
EPCAM-201ENST00000263735 OR2G3Q8NGZ4 309 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 SSMEM1Q8WWF3 244 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 RBM14Q96PK6 669 aaKnown RBP18.94■□□□□ 0.62
EPCAM-201ENST00000263735 SLC25A33Q9BSK2 321 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 AREGP15514 252 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 CX3CL1P78423 397 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 C9orf139Q6ZV77 190 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 RNASEH2CQ8TDP1 164 aaKnown RBP18.94■□□□□ 0.62
EPCAM-201ENST00000263735 MOB4Q9Y3A3 225 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 TIMM9Q9Y5J7 89 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 SOX21Q9Y651 276 aaPredicted RBP18.94■□□□□ 0.62
EPCAM-201ENST00000263735 TEX15Q9BXT5 2789 aa18.94■□□□□ 0.62
EPCAM-201ENST00000263735 REG1AP05451 166 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 FGF7P21781 194 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 RAB5CP51148 216 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 PVRIGQ6DKI7 326 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 ABHD5Q8WTS1 349 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 ARPC1AQ92747 370 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 SAT2Q96F10 170 aaPredicted RBP18.93■□□□□ 0.62
EPCAM-201ENST00000263735 RSG1Q9BU20 258 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 PLA2G2EQ9NZK7 142 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 WDR83OSQ9Y284 106 aa18.93■□□□□ 0.62
EPCAM-201ENST00000263735 LINC00862A6NCI5 91 aa18.92■□□□□ 0.62
EPCAM-201ENST00000263735 UMAD1C9J7I0 102 aa18.92■□□□□ 0.62
EPCAM-201ENST00000263735 H3BUX3 64 aa18.92■□□□□ 0.62
EPCAM-201ENST00000263735 SMAD7O15105 426 aaKnown RBP18.92■□□□□ 0.62
EPCAM-201ENST00000263735 MPDU1O75352 247 aa18.92■□□□□ 0.62
EPCAM-201ENST00000263735 ARSJQ5FYB0 599 aaPredicted RBP18.92■□□□□ 0.62
EPCAM-201ENST00000263735 NPVFQ9HCQ7 196 aa18.92■□□□□ 0.62
EPCAM-201ENST00000263735 FLNAP21333 2647 aaKnown RBP18.92■□□□□ 0.62
EPCAM-201ENST00000263735 SMCO3A2RU48 225 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 CD69Q07108 199 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 TREML4Q6UXN2 200 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 TMEM182Q6ZP80 229 aaPredicted RBP18.91■□□□□ 0.62
EPCAM-201ENST00000263735 CENPVQ7Z7K6 275 aaPredicted RBP18.91■□□□□ 0.62
EPCAM-201ENST00000263735 SLC7A5P1Q8MH63 180 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 C5orf56Q8N8D9 126 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 OR1P1Q8NH06 330 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 PITPNC1Q9UKF7 332 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 F11RQ9Y624 299 aaKnown RBP18.91■□□□□ 0.62
EPCAM-201ENST00000263735 IGHV7-81A0A0B4J1V7 117 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 ZNF705EA8MWA4 302 aaPredicted RBP18.91■□□□□ 0.62
EPCAM-201ENST00000263735 CORTO00230 105 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 APELAP0DMC3 54 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 SERF2P84101 59 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 TEX29Q8N6K0 151 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 CACNG8Q8WXS5 425 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 NPCDR1Q9BY65 106 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 RFNGQ9Y644 331 aa18.91■□□□□ 0.62
EPCAM-201ENST00000263735 ZNF469Q96JG9 3925 aaPredicted RBP18.9■□□□□ 0.62
EPCAM-201ENST00000263735 TRIM77I1YAP6 450 aa18.9■□□□□ 0.62
EPCAM-201ENST00000263735 GPX4P36969 197 aaPredicted RBP18.9■□□□□ 0.62
EPCAM-201ENST00000263735 NDPQ00604 133 aa18.9■□□□□ 0.62
EPCAM-201ENST00000263735 BTNL8Q6UX41 500 aa18.9■□□□□ 0.62
EPCAM-201ENST00000263735 TMEM219Q86XT9 240 aa18.9■□□□□ 0.62
EPCAM-201ENST00000263735 A6NDX4 124 aa18.89■□□□□ 0.61
EPCAM-201ENST00000263735 C17orf112F2Z3M2 114 aa18.89■□□□□ 0.61
EPCAM-201ENST00000263735 CTRB1P17538 263 aa18.89■□□□□ 0.61
EPCAM-201ENST00000263735 DEFB112Q30KQ8 113 aa18.89■□□□□ 0.61
EPCAM-201ENST00000263735 CTRB2Q6GPI1 263 aa18.89■□□□□ 0.61
EPCAM-201ENST00000263735 CXorf58Q96LI9 332 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms