RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CST7O76096 145 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 IFNA10P01566 189 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 PET100P0DJ07 73 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 HKR1P10072 659 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 PVALBP20472 110 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 RPL23AP62750 156 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 LGALSLQ3ZCW2 172 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 LAMTOR1Q6IAA8 161 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 OR2C3Q8N628 320 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 NOL4LQ96MY1 436 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 HIPK2Q9H2X6 1198 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 C15orf62A8K5M9 175 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 PRH1P02810 166 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 METTL15P1P0C7V9 234 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 RNASE2P10153 161 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 RPL12P30050 165 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 P2RY1P47900 373 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 MFAP2P55001 183 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 ECSCRQ19T08 205 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM65Q6PI78 240 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 C16orf82Q7Z2V1 217 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 HAPLN4Q86UW8 402 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM252Q8N6L7 170 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 HYLS1Q96M11 299 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 MFFQ9GZY8 342 aa7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-201ENST00000263694 A0A1W2PN81 502 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 HMSDA8MTL9 139 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 IGHG2P01859 326 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 FAM157CP0CG43 387 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 CHRNA7P36544 502 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 ERHP84090 104 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 DEFA5Q01523 94 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 EWSR1Q01844 656 aaKnown RBP eCLIP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 MLANAQ16655 118 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 OR8G2PQ6IF36 304 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 UNQ5815/PRO19632Q6UWF5 114 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 SLC35E3Q7Z769 313 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 C9orf62Q8N4C0 152 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM86BQ8N661 226 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM217Q8N7C4 229 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 INO80EQ8NBZ0 244 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 ZNF418Q8TF45 676 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 CIB3Q96Q77 187 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 P2RX4Q99571 388 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 ZNF702PQ9H963 129 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 ZC4H2Q9NQZ6 224 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 STRAPQ9Y3F4 350 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 DMRT1Q9Y5R6 373 aa7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 NIPBLQ6KC79 2804 aaeCLIP7.66□□□□□ -1.18
SNRNP40-201ENST00000263694 SETD2Q9BYW2 2564 aaPredicted RBP7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 IGHV3-21A0A0B4J1V1 117 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 PMS2P5A8MQ11 134 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 M0QZK8 103 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 TSC22D2O75157 780 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 NPY1RP25929 384 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 SNCAP37840 140 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 TAS2R30P59541 319 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 HILS1P60008 231 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 SCGB2A2Q13296 93 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 TMEM14EPQ6UXP3 125 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 ACOT7LQ6ZUV0 252 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 TMUB2Q71RG4 321 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 SLC24A4Q8NFF2 622 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 SGMS2Q8NHU3 365 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 AQP10Q96PS8 301 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 WNT10AQ9GZT5 417 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 WFDC1Q9HC57 220 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 CACFD1Q9UGQ2 172 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 HSPB11Q9Y547 144 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 U3KQ87 197 aa7.65□□□□□ -1.18
SNRNP40-201ENST00000263694 JMJD1CQ15652 2540 aa7.65□□□□□ -1.19
SNRNP40-201ENST00000263694 INS-IGF2F8WCM5 200 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 TRIM77I1YAP6 450 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 SOX15O60248 233 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 IGHV3-48P01763 117 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 CTRB1P17538 263 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 NUP62P37198 522 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 UBA52P62987 128 aaKnown RBP7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 BSXQ3C1V8 233 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 CTRB2Q6GPI1 263 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 C10orf99Q6UWK7 81 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 PPP1R14BQ96C90 147 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 PRSS22Q9GZN4 317 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 ARL6Q9H0F7 186 aa7.64□□□□□ -1.19
SNRNP40-201ENST00000263694 TRAV41A0A0B4J266 112 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 FBXO24O75426 580 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 IFNA4P05014 189 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 RNASE1P07998 156 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 OR8U8P0C7N1 319 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 HTR2BP41595 481 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 SULT1A1P50225 295 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 CLINT1Q14677 625 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 C2orf83Q53S99 150 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 ARSJQ5FYB0 599 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 SLC25A24Q6NUK1 477 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms