RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 C9orf139Q6ZV77 190 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
COTL1-201ENST00000262428 FBXO24O75426 580 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 IFNA5P01569 189 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 AREGP15514 252 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 CX3CL1P78423 397 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 KRTAP1-1Q07627 177 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 VWC2Q2TAL6 325 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 TUSC1Q2TAM9 212 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 P2RX4Q99571 388 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
COTL1-201ENST00000262428 TMEM147Q9BVK8 224 aa13.13□□□□□ -0.31
COTL1-201ENST00000262428 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
COTL1-201ENST00000262428 MDFIC2A0A1B0GVS7 189 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 H3BUX3 64 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 HLA-DRB1P01911 266 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 REG1AP05451 166 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 SPP1P10451 314 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 EIF5AL1Q6IS14 154 aaKnown RBP13.12□□□□□ -0.31
COTL1-201ENST00000262428 TMEM219Q86XT9 240 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 MRPL41Q8IXM3 137 aaKnown RBP13.12□□□□□ -0.31
COTL1-201ENST00000262428 SSMEM1Q8WWF3 244 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 RASL11BQ9BPW5 248 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
COTL1-201ENST00000262428 RPS10-NUDT3A0A1W2PQS6 291 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 A6NDX4 124 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 APELAP0DMC3 54 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 HSD17B13Q7Z5P4 300 aaPredicted RBP13.11□□□□□ -0.31
COTL1-201ENST00000262428 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
COTL1-201ENST00000262428 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 SUB1P53999 127 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■□□□□ 10.9
COTL1-201ENST00000262428 DLK1P80370 383 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 NDPQ00604 133 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 PVRIGQ6DKI7 326 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 C5orf56Q8N8D9 126 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 ZNF114Q8NC26 417 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 PCNPQ8WW12 178 aaKnown RBP13.11□□□□□ -0.31
COTL1-201ENST00000262428 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
COTL1-201ENST00000262428 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
COTL1-201ENST00000262428 UBE2L5PA0A1B0GUS4 154 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
COTL1-201ENST00000262428 RUNX1Q01196 453 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 LY6EQ16553 131 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 CLLU1Q5K131 121 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 SCGB1C1Q8TD33 95 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 ARPC1AQ92747 370 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
COTL1-201ENST00000262428 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
COTL1-201ENST00000262428 FGF16O43320 207 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 CD5LO43866 347 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 AMY1AP04745 511 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 FAM157CP0CG43 387 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 TAF15Q92804 592 aaKnown RBP eCLIP13.09□□□□□ -0.31
COTL1-201ENST00000262428 GNPNAT1Q96EK6 184 aaPredicted RBP13.09□□□□□ -0.31
COTL1-201ENST00000262428 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 MXRA5Q9NR99 2828 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 NMBP08949 121 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 EGR2P11161 476 aaPredicted RBP13.09□□□□□ -0.31
COTL1-201ENST00000262428 MFAP2P55001 183 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 RAB14P61106 215 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
COTL1-201ENST00000262428 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 RNASEH2CQ8TDP1 164 aaKnown RBP13.09□□□□□ -0.31
COTL1-201ENST00000262428 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 FBXO7Q9Y3I1 522 aa13.09□□□□□ -0.31
COTL1-201ENST00000262428 MLANAQ16655 118 aa13.08□□□□□ -0.32
COTL1-201ENST00000262428 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
COTL1-201ENST00000262428 OR1P1Q8NH06 330 aa13.08□□□□□ -0.32
COTL1-201ENST00000262428 ZNF48Q96MX3 618 aaPredicted RBP13.08□□□□□ -0.32
COTL1-201ENST00000262428 PITPNC1Q9UKF7 332 aa13.08□□□□□ -0.32
COTL1-201ENST00000262428 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.32
COTL1-201ENST00000262428 F11RQ9Y624 299 aaKnown RBP13.08□□□□□ -0.32
COTL1-201ENST00000262428 FNDC10F2Z333 226 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 IGHV4-59P01825 116 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 CTRB1P17538 263 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 IER3P46695 156 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 SULT1A2P50226 295 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 CD69Q07108 199 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 CTRB2Q6GPI1 263 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 TEX29Q8N6K0 151 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 OR2G3Q8NGZ4 309 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 RNF141Q8WVD5 230 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 RSG1Q9BU20 258 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 PRDM13Q9H4Q3 707 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 NPVFQ9HCQ7 196 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 TLN2Q9Y4G6 2542 aa13.07□□□□□ -0.32
COTL1-201ENST00000262428 SH2D7A6NKC9 451 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms