RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 HNF1AP20823 631 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 THBS3P49746 956 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 TMEM249Q2WGJ8 235 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 VKORC1L1Q8N0U8 176 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 FAM216AQ8WUB2 273 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 CEP250Q9BV73 2442 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 FAM90A9PA6NNJ1 464 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 K7EP13 123 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 HYPMO75409 117 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 OCC1Q8TAD7 63 aa18.57■□□□□ 0.56
MCF2L-201ENST00000261963 UBE2V1Q13404 147 aa18.56■□□□□ 0.56
MCF2L-201ENST00000261963 C17orf58Q2M2W7 97 aa18.56■□□□□ 0.56
MCF2L-201ENST00000261963 PRAMEF5Q5TYX0 476 aa18.56■□□□□ 0.56
MCF2L-201ENST00000261963 DUX4L9Q6RFH8 374 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-201ENST00000261963 TBL2Q9Y4P3 447 aaKnown RBP18.56■□□□□ 0.56
MCF2L-201ENST00000261963 GATA4P43694 442 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 IER3P46695 156 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 KRTCAP3Q53RY4 240 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 LEAP2Q969E1 77 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 TXNDC17Q9BRA2 123 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 TRAV38-1A0A0B4J264 116 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 A0A1W2PPV4 95 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 FAM222BQ8WU58 562 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 RAB1CQ92928 201 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 NRN1Q9NPD7 142 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 ZFHX2Q9C0A1 2572 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-201ENST00000261963 DSCAMO60469 2012 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 HCFC1P51610 2035 aa18.55■□□□□ 0.56
MCF2L-201ENST00000261963 TRAV3A0A0B4J244 114 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 SNURFLB1AK76 121 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 DDB2Q92466 427 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 BSNQ9UPA5 3926 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 CEACAM8P31997 349 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-201ENST00000261963 FAM27E3Q08E93 113 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 HLA-DRB5Q30154 266 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 GNB4Q9HAV0 340 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 WDR83OSQ9Y284 106 aa18.54■□□□□ 0.56
MCF2L-201ENST00000261963 SLC17A3O00476 420 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 ZNF253O75346 499 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 TOMM40O96008 361 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 VDAC2P45880 294 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-201ENST00000261963 LGALS4P56470 323 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 RELBQ01201 579 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 OR4A16Q8NH70 328 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 SFXN3Q9BWM7 321 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 GCM1Q9NP62 436 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 GCSAMLQ5JQS6 135 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 S1PR3Q99500 378 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 NCOR1P1Q9H4R4 102 aa18.53■□□□□ 0.56
MCF2L-201ENST00000261963 TRBV9A0A0B4J1U6 114 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 SCO2A0A1W2PP80 73 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 AMTP48728 403 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 PDLIM3Q53GG5 364 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-201ENST00000261963 CT45A1Q5HYN5 189 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 KLHDC1Q8N7A1 406 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 ZNF738Q8NE65 137 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 OR52E5Q8NH55 327 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 CT45A3Q8NHU0 189 aa18.52■□□□□ 0.56
MCF2L-201ENST00000261963 ALKBH7Q9BT30 221 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-201ENST00000261963 IGHV1-46P01743 117 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 CD1BP29016 333 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 TCF15Q12870 199 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 TMEM140Q9NV12 185 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 RNF7Q9UBF6 113 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 COX11Q9Y6N1 276 aa18.52■□□□□ 0.55
MCF2L-201ENST00000261963 ANKRD11Q6UB99 2663 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-201ENST00000261963 A8MXE2 369 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 STUMQ69YW2 141 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 GNB1LQ9BYB4 327 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 SMG1Q96Q15 3661 aaKnown RBP18.51■□□□□ 0.55
MCF2L-201ENST00000261963 KBTBD11-OT1A0A1B0GTJ5 212 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 RRHO14718 337 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 ERVK-16P61578 105 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 RPEL1Q2QD12 228 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 TMEM204Q9BSN7 226 aa18.51■□□□□ 0.55
MCF2L-201ENST00000261963 TRAV34A0A0B4J273 112 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 PRSS46E5RG02 174 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 TNFAIP6P98066 277 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-201ENST00000261963 LYG1Q8N1E2 194 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 OR2D3Q8NGH3 330 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 FAM57AQ8TBR7 257 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 KCNS1Q96KK3 526 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 SAA2-SAA4A0A096LPE2 208 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 GFRA3O60609 400 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 SAA2P0DJI9 122 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-201ENST00000261963 KIR2DS2P43631 304 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 GAFA1Q96PS6 74 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 BET1LQ9NYM9 111 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 IL19Q9UHD0 177 aa18.5■□□□□ 0.55
MCF2L-201ENST00000261963 FRMD6-AS1P0C7T7 363 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 PMCHP20382 165 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 CD40P25942 277 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 HINT1P49773 126 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-201ENST00000261963 OR10J3Q5JRS4 329 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 UNQ5815/PRO19632Q6UWF5 114 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 HEYLQ9NQ87 328 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-201ENST00000261963 DSCAML1Q8TD84 2053 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 K7EN84 100 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 ARL14EPLP0DKL9 152 aa18.49■□□□□ 0.55
MCF2L-201ENST00000261963 ETFRF1Q6IPR1 90 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms