RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF703Q9H7S9 590 aaPredicted RBP12.07□□□□□ -0.48
CUX2-201ENST00000261726 PTPRFP10586 1907 aa12.07□□□□□ -0.48
CUX2-201ENST00000261726 ZFC3H1O60293 1989 aaKnown RBP12.06□□□□□ -0.48
CUX2-201ENST00000261726 EFEMP2O95967 443 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 TMEM30BQ3MIR4 351 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 PRB4P10163 310 aaPredicted RBP12.06□□□□□ -0.48
CUX2-201ENST00000261726 VDAC2P45880 294 aaPredicted RBP12.06□□□□□ -0.48
CUX2-201ENST00000261726 ATP5G3P48201 142 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 Q5PR19 223 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 PIN1P1O15428 100 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 C11orf44Q8N8P7 122 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 SELENOKQ9Y6D0 94 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 COX5BP10606 129 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 NSUN5P1Q3KNT7 163 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 Q5BKY6 102 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 MIR17HGQ75NE6 70 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 JMJD8Q96S16 334 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 MRPL20Q9BYC9 149 aaKnown RBP12.06□□□□□ -0.48
CUX2-201ENST00000261726 VCX2Q9H322 139 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 CELA3AP09093 270 aa12.06□□□□□ -0.48
CUX2-201ENST00000261726 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
CUX2-201ENST00000261726 ZNF688P0C7X2 276 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 PAX1P15863 534 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 TDGF1P3P51864 188 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 GNG5P63218 68 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
CUX2-201ENST00000261726 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 CDKN1AP38936 164 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 NIT1Q86X76 327 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 TRPM7Q96QT4 1865 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 TDRD15B5MCY1 1934 aaKnown RBP12.05□□□□□ -0.48
CUX2-201ENST00000261726 C4orf51C9J302 202 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 Q6ZT83 130 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 WDYHV1Q96HA8 205 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 SIGLEC12Q96PQ1 595 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 ERVH48-1M5A8F1 160 aa12.05□□□□□ -0.48
CUX2-201ENST00000261726 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 C12orf77C9JDV5 145 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 ZNF708P17019 499 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 ZP1P60852 638 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 RIPPLY2Q5TAB7 128 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 NPDC1Q9NQX5 325 aaPredicted RBP12.04□□□□□ -0.48
CUX2-201ENST00000261726 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 SRD5A1P18405 259 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 MSGN1A6NI15 193 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 TIAF1O95411 115 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 ORMDL3Q8N138 153 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 TMEM167AQ8TBQ9 72 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 CECR9P0C854 216 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
CUX2-201ENST00000261726 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
CUX2-201ENST00000261726 H3BUT2 72 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 OR13A1Q8NGR1 328 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 VKORC1Q9BQB6 163 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 LTBRP36941 435 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 UCP3P55916 312 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 PSMG3Q9BT73 122 aaPredicted RBP12.03□□□□□ -0.48
CUX2-201ENST00000261726 F5P12259 2224 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 CD24P25063 80 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
CUX2-201ENST00000261726 CLDN16Q9Y5I7 305 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 MDC1Q14676 2089 aaKnown RBP12.03□□□□□ -0.48
CUX2-201ENST00000261726 EVI2AP22794 236 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 TPRP12270 2363 aaKnown RBP12.03□□□□□ -0.48
CUX2-201ENST00000261726 CD8AP01732 235 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 NPC2P61916 151 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 EGR4Q05215 589 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 DEFB121Q5J5C9 76 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 TIMM23BQ5SRD1 257 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 C1QL2Q7Z5L3 287 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
CUX2-201ENST00000261726 ZNF257Q9Y2Q1 563 aa12.03□□□□□ -0.48
CUX2-201ENST00000261726 VENTXO95231 258 aa12.02□□□□□ -0.48
CUX2-201ENST00000261726 PPIFP30405 207 aaKnown RBP12.02□□□□□ -0.48
CUX2-201ENST00000261726 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.48
CUX2-201ENST00000261726 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 IGHMP01871 453 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 GLRXP35754 106 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 LHX2P50458 406 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
CUX2-201ENST00000261726 NHP2Q9NX24 153 aaKnown RBP12.02□□□□□ -0.49
CUX2-201ENST00000261726 GDF15Q99988 308 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 TMEM14DPA8MWL7 114 aa12.02□□□□□ -0.49
CUX2-201ENST00000261726 RNF182Q8N6D2 247 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms