RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GCSAMQ8N6F7 178 aa11.91□□□□□ -0.5
SFSWAP-201ENST00000261674 CLCF1Q9UBD9 225 aa11.91□□□□□ -0.5
SFSWAP-201ENST00000261674 NAT8BQ9UHF3 227 aa11.91□□□□□ -0.5
SFSWAP-201ENST00000261674 CFAP46Q8IYW2 2715 aa11.91□□□□□ -0.5
SFSWAP-201ENST00000261674 MGST3O14880 152 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 MPDU1O75352 247 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 MRPS11P82912 194 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 PRR31Q5SQ13 230 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 IFI27L2Q9H2X8 130 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 LRBAP50851 2863 aa11.9□□□□□ -0.5
SFSWAP-201ENST00000261674 HELTA6NFD8 242 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 M0R143 59 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 CT45A1Q5HYN5 189 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 MED13LQ71F56 2210 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 MMD2Q8IY49 270 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 CT45A3Q8NHU0 189 aa11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.51
SFSWAP-201ENST00000261674 SAA2-SAA4A0A096LPE2 208 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 MT-CO2P00403 227 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 OR10J1P30954 320 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 CDKN1AP38936 164 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 GNG4P50150 75 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 TANC2Q9HCD6 1990 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 IGSF10Q6WRI0 2623 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 PMCHP20382 165 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 TPPP2P59282 170 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 RAB1CQ92928 201 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 DIRC2Q96SL1 478 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 JPT1Q9UK76 154 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 USP24Q9UPU5 2620 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
SFSWAP-201ENST00000261674 J3QR06 171 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 HSPE1P61604 102 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 CCL13Q99616 98 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 A6NNC1 897 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 CD99P14209 185 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 Q6ZWC4 215 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 TACC2O95359 2948 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 REG1BP48304 166 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 TMPRSS3P57727 454 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 LOXL3P58215 753 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 ZNF124Q15973 351 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 RPEL1Q2QD12 228 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 C1orf159Q96HA4 380 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 EAF1Q96JC9 268 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
SFSWAP-201ENST00000261674 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 YPEL1O60688 119 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 NTF3P20783 257 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 BHLHA15Q7RTS1 189 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 BTF3L4Q96K17 158 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 OR10W1Q8NGF6 305 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 CENPEQ02224 2701 aa11.87□□□□□ -0.51
SFSWAP-201ENST00000261674 C15orf61A6NNL5 157 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 MMP23AO75900 390 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 TIGITQ495A1 244 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 TRAT1Q6PIZ9 186 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 SIGLECL1Q8N7X8 197 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 OR9G1Q8NH87 305 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 SARAFQ96BY9 339 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 WNK2Q9Y3S1 2297 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 Q6ZS92 163 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 TRGV10A0A0A0MS01 117 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 AMTP48728 403 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 PRR27Q6MZM9 219 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 GFRALQ6UXV0 394 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 Q8NA96 180 aa11.86□□□□□ -0.51
SFSWAP-201ENST00000261674 VAMP8Q9BV40 100 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms