RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 C1orf185Q5T7R7 199 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 IGFL3Q6UXB1 125 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 SNRNP40Q96DI7 357 aaKnown RBP12.44□□□□□ -0.42
DDX56-201ENST00000258772 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 FKBP11Q9NYL4 201 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 ZNRD1Q9P1U0 126 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 ARL2-SNX15V9GYD0 113 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 A8MXE2 369 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 CBLN1P23435 193 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 SELENOTP62341 195 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 FAM27E3Q08E93 113 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 BEND2Q8NDZ0 799 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 TMEM167BQ9NRX6 74 aa12.44□□□□□ -0.42
DDX56-201ENST00000258772 RP1L1Q8IWN7 2480 aaPredicted RBP12.43□□□□□ -0.42
DDX56-201ENST00000258772 HELTA6NFD8 242 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 TNFSF4P23510 183 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 RAB4BP61018 213 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 TMEM30BQ3MIR4 351 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 C2orf83Q53S99 150 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 GRIFINA4D1Z8 144 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 SCGB1D1O95968 90 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 GATA2P23769 480 aaPredicted RBP12.43□□□□□ -0.42
DDX56-201ENST00000258772 CRYBB3P26998 211 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 OR10J1P30954 320 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
DDX56-201ENST00000258772 LGALS4P56470 323 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 OR5I1Q13606 314 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 LBHQ53QV2 105 aaPredicted RBP12.43□□□□□ -0.42
DDX56-201ENST00000258772 IGF2-ASQ6U949 168 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 ZNF503Q96F45 646 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 BET1LQ9NYM9 111 aa12.43□□□□□ -0.42
DDX56-201ENST00000258772 TECRQ9NZ01 308 aaKnown RBP12.43□□□□□ -0.42
DDX56-201ENST00000258772 hADV38S2A0JD32 116 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 SAA1P0DJI8 122 aaPredicted RBP12.42□□□□□ -0.42
DDX56-201ENST00000258772 CD40P25942 277 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 ERVFC1-1P60608 527 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 MLANAQ16655 118 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 RPEL1Q2QD12 228 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 RND1Q92730 232 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 MISP3Q96FF7 219 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 SLC35E1Q96K37 410 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 MS4A10Q96PG2 267 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 V9GYV3 84 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 IRF2P14316 349 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 Q6ZS92 163 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 MMD2Q8IY49 270 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 OR5B3Q8NH48 314 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
DDX56-201ENST00000258772 MRPL18Q9H0U6 180 aaKnown RBP12.42□□□□□ -0.42
DDX56-201ENST00000258772 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
DDX56-201ENST00000258772 NDUFB7P17568 137 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
DDX56-201ENST00000258772 GNG4P50150 75 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 KRTCAP3Q53RY4 240 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 CENPWQ5EE01 88 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 PNKDQ8N490 385 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 OR1L8Q8NGR8 309 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 CMTM2Q8TAZ6 248 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 C19orf24Q9BVV8 132 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
DDX56-201ENST00000258772 OR7C2O60412 319 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 SNRPCP09234 159 aaKnown RBP12.4□□□□□ -0.42
DDX56-201ENST00000258772 OR5G3P0C626 314 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 OR10W1Q8NGF6 305 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 OR1L6Q8NGR2 347 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 OR9G1Q8NH87 305 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 FRMD6-AS1P0C7T7 363 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 CRISP2P16562 243 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 TAS2R60P59551 318 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 CCL8P80075 99 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 CD69Q07108 199 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
DDX56-201ENST00000258772 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.42
DDX56-201ENST00000258772 FCN1O00602 326 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 OR10J4P0C629 311 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 RNF224P0DH78 156 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 IER3P46695 156 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 LINC00310P59036 64 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 TAS2R45P59539 299 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 SSTP61278 116 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
DDX56-201ENST00000258772 ESDP10768 282 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
DDX56-201ENST00000258772 PAFAH1B2P68402 229 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 DOLPP1Q86YN1 238 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 OR8I2Q8N0Y5 310 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 SLC25A33Q9BSK2 321 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
DDX56-201ENST00000258772 POLR3KQ9Y2Y1 108 aaPredicted RBP12.39□□□□□ -0.43
DDX56-201ENST00000258772 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 GGTLC3B5MD39 225 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 C8orf88P0DMB2 117 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 USF2Q15853 346 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms