RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KIR2DL5BQ8NHK3 375 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 MOB3AQ96BX8 217 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 BSCL2Q96G97 398 aaPredicted RBP7.63□□□□□ -1.19
VPS50-201ENST00000251739 YTHDF1Q9BYJ9 559 aaKnown RBP7.63□□□□□ -1.19
VPS50-201ENST00000251739 NDUFA4L2Q9NRX3 87 aa7.63□□□□□ -1.19
VPS50-201ENST00000251739 F11RQ9Y624 299 aaKnown RBP7.63□□□□□ -1.19
VPS50-201ENST00000251739 NUPR2A6NF83 97 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 OR2T8A6NH00 312 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 NDUFA4O00483 81 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 UBE2CO00762 179 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 PAX4O43316 350 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 TMEM127O75204 238 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 TRAPPC2P0DI81 140 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 TRAPPC2BP0DI82 140 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 OR13C7P0DN81 318 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 NAT1P18440 290 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 F2RP25116 425 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 APOC4P55056 127 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 IDNKQ5T6J7 187 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 AADACL3Q5VUY0 350 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 DHRS11Q6UWP2 260 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 OR1L8Q8NGR8 309 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 BORCS5Q969J3 196 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 RNF183Q96D59 192 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 FXYD6Q9H0Q3 95 aa7.62□□□□□ -1.19
VPS50-201ENST00000251739 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 K7EMT4 169 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 XRCC3O43542 346 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 SPRY2O43597 315 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 RLN1P04808 185 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 FCER2P06734 321 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 RPA2P15927 270 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 PMS2P11Q13670 270 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 CEMP1Q6PRD7 247 aaPredicted RBP7.61□□□□□ -1.19
VPS50-201ENST00000251739 SLC38A6Q8IZM9 456 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 DMBX1Q8NFW5 382 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 SCARB1Q8WTV0 552 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 FCAMRQ8WWV6 532 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 LSM10Q969L4 123 aaKnown RBP7.61□□□□□ -1.19
VPS50-201ENST00000251739 DIABLOQ9NR28 239 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 C21orf62Q9NYP8 219 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 EHFQ9NZC4 300 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 UBQLN2Q9UHD9 624 aa7.61□□□□□ -1.19
VPS50-201ENST00000251739 AGRNO00468 2067 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 LOC100506127A0A0U1RQW1 187 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 MEIS3P1A6NDR6 274 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 OR4C46A6NHA9 309 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 DBX1A6NMT0 343 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 C15orf62A8K5M9 175 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 CYB5BO43169 146 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 PGLYRP1O75594 196 aaPredicted RBP7.6□□□□□ -1.19
VPS50-201ENST00000251739 CTSGP08311 255 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 FCGR2BP31994 310 aaPredicted RBP7.6□□□□□ -1.19
VPS50-201ENST00000251739 RFX2P48378 723 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 HERV-K104P61576 105 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 ERVK-16P61578 105 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 OR5B3Q8NH48 314 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 DGCR14Q96DF8 476 aaKnown RBP7.6□□□□□ -1.19
VPS50-201ENST00000251739 OR10C1Q96KK4 312 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 MAP6D1Q9H9H5 199 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 FAM212BQ9NTI7 297 aaPredicted RBP7.6□□□□□ -1.19
VPS50-201ENST00000251739 TMEM14BQ9NUH8 114 aa7.6□□□□□ -1.19
VPS50-201ENST00000251739 IGHV3OR16-8A0A075B7F1 116 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 IGHV3-21A0A0B4J1V1 117 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 C15orf61A6NNL5 157 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 I3L2K1 104 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 ATP6V1G2O95670 118 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 KRASP01116 189 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 CTSDP07339 412 aaPredicted RBP7.59□□□□□ -1.19
VPS50-201ENST00000251739 LPAR6P43657 344 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 LAMTOR1Q6IAA8 161 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 SLC25A24Q6NUK1 477 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 STPG3Q8N7X2 389 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 ZNF114Q8NC26 417 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 OR1P1Q8NH06 330 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 ZNF2Q9BSG1 426 aaPredicted RBP7.59□□□□□ -1.19
VPS50-201ENST00000251739 IFT46Q9NQC8 304 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 SMPXQ9UHP9 88 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 NSG2Q9Y328 171 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 OR51B2Q9Y5P1 312 aa7.59□□□□□ -1.19
VPS50-201ENST00000251739 IGHV7-4-1A0A0J9YVY3 117 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 GPR31O00270 319 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 CHEK1O14757 476 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 LY6G6CO95867 125 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 G6PCP35575 357 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 TGFBR1P36897 503 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 TAS2R46P59540 309 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 TAS2R20P59543 309 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 NEDD8Q15843 81 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 KCTD21Q4G0X4 260 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 UBE2NLQ5JXB2 153 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 FAM90A2PQ658T7 463 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 LYSMD2Q8IV50 215 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 CROCCP3Q8IVE0 287 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 ZBTB8BQ8NAP8 495 aaPredicted RBP7.58□□□□□ -1.2
VPS50-201ENST00000251739 SEC22AQ96IW7 307 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 RNF2Q99496 336 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 C20orf24Q9BUV8 137 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms