RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 ZNF430Q9H8G1 570 aaPredicted RBP18.48■□□□□ 0.55
HOXD9-201ENST00000249499 IGHV1-3A0A0C4DH29 117 aa18.47■□□□□ 0.55
HOXD9-201ENST00000249499 CD69Q07108 199 aa18.47■□□□□ 0.55
HOXD9-201ENST00000249499 STPG3Q8N7X2 389 aa18.47■□□□□ 0.55
HOXD9-201ENST00000249499 OR4P4Q8NGL7 312 aa18.47■□□□□ 0.55
HOXD9-201ENST00000249499 INSIG2Q9Y5U4 225 aa18.47■□□□□ 0.55
HOXD9-201ENST00000249499 CXorf1O96002 111 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 GCSAMLQ5JQS6 135 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 MMD2Q8IY49 270 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 NANPQ8TBE9 248 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 SLC35E1Q96K37 410 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 SDF2L1Q9HCN8 221 aa18.46■□□□□ 0.55
HOXD9-201ENST00000249499 C22orf46C9J442 243 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 LY6LH3BQJ8 138 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 OR2C1O95371 312 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 RHOBP62745 196 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 SMUG1Q53HV7 270 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 OR10W1Q8NGF6 305 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 TMEM242Q9NWH2 141 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 SLC45A2Q9UMX9 530 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 PRELID1Q9Y255 219 aa18.46■□□□□ 0.54
HOXD9-201ENST00000249499 ABCA4P78363 2273 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 ZNF727A8MUV8 499 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 SLC25A17O43808 307 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 CRYGBP07316 175 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 OR11H6Q8NGC7 330 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 RPEQ96AT9 228 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 C19orf24Q9BVV8 132 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 SSBP3Q9BWW4 388 aaPredicted RBP18.45■□□□□ 0.54
HOXD9-201ENST00000249499 NAT8Q9UHE5 227 aa18.45■□□□□ 0.54
HOXD9-201ENST00000249499 CGB1A6NKQ9 187 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 EIF3GO75821 320 aaKnown RBP eCLIP18.44■□□□□ 0.54
HOXD9-201ENST00000249499 IGFBP2P18065 325 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 RAB5BP61020 215 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 CYP2G1PQ6ZSU1 146 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 PNKDQ8N490 385 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 SSMEM1Q8WWF3 244 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 MALSU1Q96EH3 234 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 YPEL4Q96NS1 127 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 ONECUT1Q9UBC0 465 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 HIVEP3Q5T1R4 2406 aa18.44■□□□□ 0.54
HOXD9-201ENST00000249499 A6NNC1 897 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 ENSAO43768 121 aaKnown RBP18.43■□□□□ 0.54
HOXD9-201ENST00000249499 PDE6DO43924 150 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 LY6HO94772 140 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 GNLYP22749 145 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 GAMTQ14353 236 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 ISOC2Q96AB3 205 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 LOC105371242A0A075B767 164 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 PAGE4O60829 102 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 MRGPRG-AS1Q2M3A8 158 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 C1orf122Q6ZSJ8 110 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 IQCF2Q8IXL9 164 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 OR4F5Q8NH21 305 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 OR4F4Q96R69 305 aa18.43■□□□□ 0.54
HOXD9-201ENST00000249499 FASNP49327 2511 aaKnown RBP18.43■□□□□ 0.54
HOXD9-201ENST00000249499 HELZ2Q9BYK8 2649 aaKnown RBP18.42■□□□□ 0.54
HOXD9-201ENST00000249499 C1orf196B1AJZ1 125 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 E7EUB6 86 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 MT-CO2P00403 227 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 LINC00869P0C866 280 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 COX7A1P24310 79 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 WT1-ASQ06250 92 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 PRSS8Q16651 343 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 SPNS3Q6ZMD2 512 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 SLC16A13Q7RTY0 426 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 MOB3BQ86TA1 216 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 ZNF114Q8NC26 417 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 SMIM7Q9BQ49 75 aa18.42■□□□□ 0.54
HOXD9-201ENST00000249499 A0A1W2PPR1 153 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 DEFA4P12838 97 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 RAB5AP20339 215 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 UQCRFS1P47985 274 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 PVRIGQ6DKI7 326 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 KIR3DL3Q8N743 410 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 C11orf94C9JXX5 98 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 F6UZH7 168 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 GPR6P46095 362 aaPredicted RBP18.41■□□□□ 0.54
HOXD9-201ENST00000249499 PSG5Q15238 335 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 TMEM241Q24JQ0 296 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 ABHD5Q8WTS1 349 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 RITA1Q96K30 269 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 CTDSP1Q9GZU7 261 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 BIN3Q9NQY0 253 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 SIGLEC9Q9Y336 463 aa18.41■□□□□ 0.54
HOXD9-201ENST00000249499 TNCP24821 2201 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 IGHV3-72A0A0B4J1Y9 119 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 ARL14EPLP0DKL9 152 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 PRTN3P24158 256 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 CEACAM3P40198 252 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 FAM24BQ8N5W8 94 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 GATAD1Q8WUU5 269 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 ARL2-SNX15V9GYD0 113 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 MYO18BQ8IUG5 2567 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 FLNCQ14315 2725 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 GCN1Q92616 2671 aaKnown RBP18.4■□□□□ 0.54
HOXD9-201ENST00000249499 MALRD1Q5VYJ5 2156 aa18.4■□□□□ 0.54
HOXD9-201ENST00000249499 CLN5O75503 358 aa18.39■□□□□ 0.54
HOXD9-201ENST00000249499 ACTL6BO94805 426 aa18.39■□□□□ 0.54
HOXD9-201ENST00000249499 GOSR1O95249 250 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms