RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 RALYQ9UKM9 306 aaKnown RBP12.89□□□□□ -0.35
LRFN1-201ENST00000248668 PPIAL4EA0A075B759 164 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 PPIAL4DF5H284 164 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 PPIAL4FP0DN26 164 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 CENPVQ7Z7K6 275 aaPredicted RBP12.89□□□□□ -0.35
LRFN1-201ENST00000248668 MGST2Q99735 147 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 MRPL20Q9BYC9 149 aaKnown RBP12.89□□□□□ -0.35
LRFN1-201ENST00000248668 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 E7EQL1 145 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 CA2P00918 260 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
LRFN1-201ENST00000248668 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 OR51B2Q9Y5P1 312 aa12.89□□□□□ -0.35
LRFN1-201ENST00000248668 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
LRFN1-201ENST00000248668 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
LRFN1-201ENST00000248668 SDF2L1Q9HCN8 221 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 ASH1LQ9NR48 2969 aaKnown RBP12.88□□□□□ -0.35
LRFN1-201ENST00000248668 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 NPY1RP25929 384 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 KIR2DS2P43631 304 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 SLC24A4Q8NFF2 622 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
LRFN1-201ENST00000248668 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 RNF24Q9Y225 148 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
LRFN1-201ENST00000248668 RPLP1P05386 114 aaKnown RBP12.87□□□□□ -0.35
LRFN1-201ENST00000248668 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
LRFN1-201ENST00000248668 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 PARLQ9H300 379 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 PXMP4Q9Y6I8 212 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 ATP5G3P48201 142 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
LRFN1-201ENST00000248668 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 TEX38Q6PEX7 206 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
LRFN1-201ENST00000248668 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 RAXQ9Y2V3 346 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 LINC00312Q9Y6C7 94 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 MLANAQ16655 118 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 OR10W1Q8NGF6 305 aa12.87□□□□□ -0.35
LRFN1-201ENST00000248668 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 J3QR06 171 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 CHRNB4P30926 498 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 ZNF835Q9Y2P0 537 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 C11orf94C9JXX5 98 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 DVL1O14640 695 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 ACTL6BO94805 426 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 SAA1P0DJI8 122 aaPredicted RBP12.86□□□□□ -0.35
LRFN1-201ENST00000248668 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 SPATA31B1PQ5VZV4 182 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 BEND2Q8NDZ0 799 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 P2RX4Q99571 388 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 JKAMPQ9P055 326 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 GAB2Q9UQC2 676 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
LRFN1-201ENST00000248668 HRASP01112 189 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 GATA2P23769 480 aaPredicted RBP12.86□□□□□ -0.35
LRFN1-201ENST00000248668 C1orf159Q96HA4 380 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 DNAJC4Q9NNZ3 241 aa12.86□□□□□ -0.35
LRFN1-201ENST00000248668 A0A087WWC5 75 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 NDUFB3O43676 98 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 HARBI1Q96MB7 349 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 DERL1Q9BUN8 251 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 GAL3ST2Q9H3Q3 398 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 IGFBP2P18065 325 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 RBPJQ06330 500 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 TMEM241Q24JQ0 296 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.85□□□□□ -0.35
LRFN1-201ENST00000248668 OR4X1Q8NH49 305 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
LRFN1-201ENST00000248668 PGPEP1LA6NFU8 196 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 C11orf42Q8N5U0 333 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 C22orf15Q8WYQ4 148 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 PITPNC1Q9UKF7 332 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 FOXA2Q9Y261 457 aaPredicted RBP12.84□□□□□ -0.35
LRFN1-201ENST00000248668 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 NPPCP23582 126 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 C10orf55Q5SWW7 151 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 C16orf82Q7Z2V1 217 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms