RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TCF24Q7RTU0 167 aa15.18■□□□□ 0.02
PTPN12-201ENST00000248594 PPIAL4CA0A0B4J2A2 164 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 PPIAL4GP0DN37 164 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 SPACA9Q96E40 222 aaPredicted RBP15.17■□□□□ 0.02
PTPN12-201ENST00000248594 JMJD8Q96S16 334 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
PTPN12-201ENST00000248594 G3V4G9 280 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 SYS1-DBNDD2H3BUS1 97 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 GDF5OSQ5U4N7 250 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 OR2K2Q8NGT1 345 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 SPCS1Q9Y6A9 102 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 TNRC18O15417 2968 aaPredicted RBP15.17■□□□□ 0.02
PTPN12-201ENST00000248594 A0A1W2PPC4 97 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 FAM90A26D6RGX4 464 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 OR9G9P0C7N8 305 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 CCL3P10147 92 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 ZNF718Q3SXZ3 478 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 FOXL2NBQ6ZUU3 175 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 OR10AG1Q8NH19 301 aa15.17■□□□□ 0.02
PTPN12-201ENST00000248594 TRAV9-1A0A075B6T8 112 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 SAA2-SAA4A0A096LPE2 208 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 IGFBP2P18065 325 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 CEACAM3P40198 252 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 MOB3BQ86TA1 216 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 AESQ08117 197 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 ST20Q9HBF5 79 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 DMXL2Q8TDJ6 3036 aa15.16■□□□□ 0.02
PTPN12-201ENST00000248594 ANKRD30BLA7E2S9 258 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 PRSS57Q6UWY2 283 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 TNRC6AQ8NDV7 1962 aaKnown RBP15.15■□□□□ 0.02
PTPN12-201ENST00000248594 OR2H2O95918 312 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 FOXG1P55316 489 aaPredicted RBP15.15■□□□□ 0.02
PTPN12-201ENST00000248594 TBR1Q16650 682 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 CADP27708 2225 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 HIGD1CA8MV81 97 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 TMEM97Q5BJF2 176 aa15.15■□□□□ 0.02
PTPN12-201ENST00000248594 MUC22E2RYF6 1773 aaPredicted RBP15.15■□□□□ 0.02
PTPN12-201ENST00000248594 TRGV10A0A0A0MS01 117 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.14■□□□□ 0.01
PTPN12-201ENST00000248594 TRAV3A0A0B4J244 114 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 TEX48A0A1B0GUV7 120 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 KLK10O43240 276 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 SMG1Q96Q15 3661 aaKnown RBP15.14■□□□□ 0.01
PTPN12-201ENST00000248594 IZUMO1RA6ND01 250 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 MT-CO3P00414 261 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 MYOD1P15172 320 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 FXYD7P58549 80 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 CEACAM21Q3KPI0 293 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 DUSP13Q9UII6 198 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 A0A1W2PRE2 83 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 K7EMI3 77 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 CDIPTO14735 213 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 HBZP02008 142 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 Q8N7P7 452 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 NUP35Q8NFH5 326 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 OR8A1Q8NGG7 326 aa15.14■□□□□ 0.01
PTPN12-201ENST00000248594 SPAARA0A1B0GVQ0 90 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 LINC00473A8K010 186 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 PLAUP00749 431 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 IGHV3-48P01763 117 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 P04436 131 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 SLC25A40Q8TBP6 338 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 MAP1LC3CQ9BXW4 147 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 COMMD5Q9GZQ3 224 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 A0A0G2JLM5 398 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 A0A1B0GV72 72 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 RAB9AP51151 201 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 HIST1H1AQ02539 215 aaPredicted RBP15.13■□□□□ 0.01
PTPN12-201ENST00000248594 SCGB2A2Q13296 93 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 LYSMD4Q5XG99 296 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 GALMQ96C23 342 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 TPPP3Q9BW30 176 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 RAB31Q13636 194 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.13■□□□□ 0.01
PTPN12-201ENST00000248594 SPEM1Q8N4L4 309 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 PGLYRP4Q96LB8 373 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 PRRG4Q9BZD6 226 aa15.13■□□□□ 0.01
PTPN12-201ENST00000248594 TSSC4Q9Y5U2 329 aaPredicted RBP15.13■□□□□ 0.01
PTPN12-201ENST00000248594 C2CD4DB7Z1M9 353 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 OPRK1P41145 380 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 TRIP6Q15654 476 aaKnown RBP15.12■□□□□ 0.01
PTPN12-201ENST00000248594 Q6ZS49 121 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 OR10W1Q8NGF6 305 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 SH2D2AQ9NP31 389 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 OBP2AQ9NY56 170 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 TRAV26-1A0A087WT03 109 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 PCBD1P61457 104 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 KIR3DS1Q14943 382 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 C5orf30Q96GV9 206 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 HES4Q9HCC6 221 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 OR51B2Q9Y5P1 312 aa15.12■□□□□ 0.01
PTPN12-201ENST00000248594 TRAV5A0A0B4J249 113 aa15.11■□□□□ 0.01
PTPN12-201ENST00000248594 SIGMAR1Q99720 223 aa15.11■□□□□ 0.01
PTPN12-201ENST00000248594 OSTCQ9NRP0 149 aa15.11■□□□□ 0.01
PTPN12-201ENST00000248594 IGHV1OR21-1A0A087WYE8 117 aa15.11■□□□□ 0.01
PTPN12-201ENST00000248594 IGHV1-24A0A0C4DH33 117 aa15.11■□□□□ 0.01
PTPN12-201ENST00000248594 WIPI1Q5MNZ9 446 aaPredicted RBP15.11■□□□□ 0.01
PTPN12-201ENST00000248594 ACP7Q6ZNF0 438 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms