RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 CDKN1AP38936 164 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 ZNF146Q15072 292 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LNP1A1A4G5 178 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 CXorf65A6NEN9 183 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 INSP01308 110 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 FAM27E3Q08E93 113 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LY75O60449 1722 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 TMEM50AO95807 157 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LEPP41159 167 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 TNFSF18Q9UNG2 199 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 PTP4A3O75365 173 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LOC101059948A0A1B0GTJ6 334 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 PTGDSP41222 190 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LILRA6Q6PI73 481 aa11.24□□□□□ -0.61
NEK9-201ENST00000238616 LINC00158P58513 81 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 TMEM52Q8NDY8 209 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 C8orf46Q8TAG6 207 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 SAP30O75446 220 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 NANOS3P60323 173 aaKnown RBP11.23□□□□□ -0.61
NEK9-201ENST00000238616 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 FXYD1O00168 92 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 EGR1P18146 543 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 ZNF501Q96CX3 271 aaPredicted RBP11.23□□□□□ -0.61
NEK9-201ENST00000238616 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
NEK9-201ENST00000238616 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 JMJD8Q96S16 334 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 FXYD7P58549 80 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 CENPVL1A0A0U1RR11 272 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 PEX11BO96011 259 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 SLC25A28Q96A46 364 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 TMEM186Q96B77 213 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
NEK9-201ENST00000238616 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 MT-ND6P03923 174 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 CRYBA2P53672 197 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 NABP2Q9BQ15 211 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 PCNX3Q9H6A9 2034 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 TRAV2A0A0B4J234 112 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 SELENOHQ8IZQ5 122 aaKnown RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 JPT2Q9H910 190 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 ZNF703Q9H7S9 590 aaPredicted RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 AGRNO00468 2067 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 NAT1P18440 290 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 HIST1H4AP62805 103 aaKnown RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 TTC9CQ8N5M4 171 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 HMGCLL1Q8TB92 370 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 NPIPB8E9PQR5 432 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 NPIPB9F8W1W9 429 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 NPIPB7O75200 414 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
NEK9-201ENST00000238616 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 FOXJ2Q9P0K8 574 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 A0A1W2PPV9 198 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 GZMBP10144 247 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 SLC25A45Q8N413 288 aa11.22□□□□□ -0.61
NEK9-201ENST00000238616 A0A1B0GV90 55 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 CGB3P0DN86 165 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 GP6Q9HCN6 339 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 LINC00614P0C842 121 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 ZNF79Q15937 498 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 LIMS2Q7Z4I7 341 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.61
NEK9-201ENST00000238616 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.61
NEK9-201ENST00000238616 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.61
NEK9-201ENST00000238616 FAM206AQ9NX38 181 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 ELOVL5Q9NYP7 299 aa11.21□□□□□ -0.61
NEK9-201ENST00000238616 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.61
NEK9-201ENST00000238616 SPRED2Q7Z698 418 aa11.21□□□□□ -0.62
NEK9-201ENST00000238616 MSRB3Q8IXL7 192 aa11.21□□□□□ -0.62
NEK9-201ENST00000238616 C9orf62Q8N4C0 152 aa11.21□□□□□ -0.62
NEK9-201ENST00000238616 ABHD17AQ96GS6 310 aa11.21□□□□□ -0.62
NEK9-201ENST00000238616 SDHCQ99643 169 aaPredicted RBP11.21□□□□□ -0.62
NEK9-201ENST00000238616 PSMG3Q9BT73 122 aaPredicted RBP11.21□□□□□ -0.62
NEK9-201ENST00000238616 CGAP01215 116 aa11.21□□□□□ -0.62
NEK9-201ENST00000238616 GPR132Q9UNW8 380 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms