RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 J3QR06 171 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 M0QZK8 103 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 UPK2O00526 184 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 ZNF788Q6ZQV5 615 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 MRPL52Q86TS9 123 aaKnown RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 DEFB108BQ8NET1 73 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 CT45A6P0DMU7 189 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 CT45A5P0DMU8 189 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 CT45A7P0DMV0 189 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 TMEM30BQ3MIR4 351 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 C1orf185Q5T7R7 199 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 FAM122AQ96E09 287 aa13.3□□□□□ -0.28
LTBR-201ENST00000228918 EAF1Q96JC9 268 aaPredicted RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 RPUSD1Q9UJJ7 312 aaKnown RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 POLR3KQ9Y2Y1 108 aaPredicted RBP13.3□□□□□ -0.28
LTBR-201ENST00000228918 ACTL6BO94805 426 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 ZNF90Q03938 601 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 NABP2Q9BQ15 211 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 SLC35D1Q9NTN3 355 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 DYSFO75923 2080 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 SRRM4A7MD48 611 aaKnown RBP13.29□□□□□ -0.28
LTBR-201ENST00000228918 SLC17A3O00476 420 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 TM4SF5O14894 197 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 NUPR1O60356 82 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 SELENOVP59797 346 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 RTL8BQ17RB0 113 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 IGF2-ASQ6U949 168 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 MOB3BQ86TA1 216 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 LRFN3Q9BTN0 628 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
LTBR-201ENST00000228918 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 NPSP0C0P6 89 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 LINC00614P0C842 121 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 SELENOTP62341 195 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 IGFL3Q6UXB1 125 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 RPLP1P05386 114 aaKnown RBP13.28□□□□□ -0.28
LTBR-201ENST00000228918 CBLN1P23435 193 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 PSG5Q15238 335 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 C21orf62-AS1Q17RA5 79 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 C22orf34Q6ZV56 151 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 SNRNP40Q96DI7 357 aaKnown RBP13.28□□□□□ -0.28
LTBR-201ENST00000228918 SLC35E1Q96K37 410 aa13.28□□□□□ -0.28
LTBR-201ENST00000228918 TEX50A0A1B0GTY4 177 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 A8MXE2 369 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 SCGB1D1O95968 90 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 TNFSF4P23510 183 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 LGALS4P56470 323 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 TEX36Q5VZQ5 186 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 ZNF503Q96F45 646 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 BET1LQ9NYM9 111 aa13.27□□□□□ -0.28
LTBR-201ENST00000228918 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
LTBR-201ENST00000228918 SAA1P0DJI8 122 aaPredicted RBP13.27□□□□□ -0.29
LTBR-201ENST00000228918 ATP5IP56385 69 aaPredicted RBP13.27□□□□□ -0.29
LTBR-201ENST00000228918 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.29
LTBR-201ENST00000228918 TECRQ9NZ01 308 aaKnown RBP13.27□□□□□ -0.29
LTBR-201ENST00000228918 NAGKQ9UJ70 344 aa13.27□□□□□ -0.29
LTBR-201ENST00000228918 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
LTBR-201ENST00000228918 V9GYV3 84 aa13.27□□□□□ -0.29
LTBR-201ENST00000228918 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
LTBR-201ENST00000228918 CD40P25942 277 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 OR10J1P30954 320 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 PCP4P48539 62 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 CENPWQ5EE01 88 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 OR1L8Q8NGR8 309 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 OR5B3Q8NH48 314 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 CMTM2Q8TAZ6 248 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
LTBR-201ENST00000228918 BOD1L1Q8NFC6 3051 aa13.26□□□□□ -0.29
LTBR-201ENST00000228918 hADV38S2A0JD32 116 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 OR5G3P0C626 314 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 GATA2P23769 480 aaPredicted RBP13.25□□□□□ -0.29
LTBR-201ENST00000228918 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 OR5I1Q13606 314 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 Q6ZS92 163 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
LTBR-201ENST00000228918 LINC00312Q9Y6C7 94 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 IRF2P14316 349 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 CRYBB3P26998 211 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 GNG4P50150 75 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 LINC00310P59036 64 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 PQLC2Q6ZP29 291 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 MMD2Q8IY49 270 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 PNKDQ8N490 385 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 OR1L6Q8NGR2 347 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 RND1Q92730 232 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
LTBR-201ENST00000228918 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
LTBR-201ENST00000228918 HELTA6NFD8 242 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 A6NNC1 897 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 CEACAM8P31997 349 aaPredicted RBP13.24□□□□□ -0.29
LTBR-201ENST00000228918 KRTCAP3Q53RY4 240 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms