RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 RNASE11Q8TAA1 199 aaKnown RBP9.72□□□□□ -0.85
LSM5-201ENST00000223084 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 IGHV3-21A0A0B4J1V1 117 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 WI2-2373I1.2A0A1W2PRP0 233 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 ST8SIA3O43173 380 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 SAP30O75446 220 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 ATG12O94817 140 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 HIST1H1BP16401 226 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 CCR6P51684 374 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 HSPE1P61604 102 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 SUPT4H1P63272 117 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 TMEM268Q5VZI3 342 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 ACSM6Q6P461 480 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 CLEC19AQ6UXS0 136 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 HSD17B13Q7Z5P4 300 aaPredicted RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 TMED4Q7Z7H5 227 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 RBPMSQ93062 196 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 GPR146Q96CH1 333 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 RRNAD1Q96FB5 475 aaKnown RBP9.71□□□□□ -0.86
LSM5-201ENST00000223084 TMEM56Q96MV1 263 aa9.71□□□□□ -0.86
LSM5-201ENST00000223084 K7EIL1 84 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 PRCDQ00LT1 54 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 HAPLN4Q86UW8 402 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 OR2C3Q8N628 320 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 MRAPQ8TCY5 172 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 ZC4H2Q9NQZ6 224 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 KCNIP3Q9Y2W7 256 aa9.7□□□□□ -0.86
LSM5-201ENST00000223084 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
LSM5-201ENST00000223084 OR2C1O95371 312 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 IFNA17P01571 189 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 IL7P13232 177 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 IL34Q6ZMJ4 242 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 ZNF429Q86V71 674 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 SLC35G3Q8N808 338 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 OR9G4Q8NGQ1 327 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 ZNF502Q8TBZ5 544 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 DEDD2Q8WXF8 326 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 PRR25Q96S07 402 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
LSM5-201ENST00000223084 PLEKHA3Q9HB20 300 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 TMEM56-RWDD3S4R434 201 aa9.69□□□□□ -0.86
LSM5-201ENST00000223084 CLEC3BP05452 202 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 ARL3P36405 182 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 INSL3P51460 131 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 LYZL2Q7Z4W2 148 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 FAM219AQ8IW50 185 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 MISP3Q96FF7 219 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 CXorf58Q96LI9 332 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 PDCD10Q9BUL8 212 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 ELOVL1Q9BW60 279 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 THYN1Q9P016 225 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
LSM5-201ENST00000223084 TRBV7-1A0A0A6YYK4 115 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 IGHV3-35A0A0C4DH35 117 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 NAP1L6A6NFF2 107 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 K7EIM0 57 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 CYB5BO43169 146 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 GGCTO75223 188 aaKnown RBP9.67□□□□□ -0.86
LSM5-201ENST00000223084 NXPH3O95157 252 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 CSN3P07498 182 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 VAMP1P23763 118 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 GPR183P32249 361 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 BTCP35070 178 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 ERHP84090 104 aaKnown RBP9.67□□□□□ -0.86
LSM5-201ENST00000223084 RBMS2Q15434 407 aaKnown RBP9.67□□□□□ -0.86
LSM5-201ENST00000223084 TATDN3Q17R31 274 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 ANKRD55Q3KP44 614 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 TMEM128Q5BJH2 165 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 SCARB1Q8WTV0 552 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 IL22RA2Q969J5 263 aa9.67□□□□□ -0.86
LSM5-201ENST00000223084 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.67□□□□□ -0.86
LSM5-201ENST00000223084 NBEAL2Q6ZNJ1 2754 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 OR2T8A6NH00 312 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 PLA2G10O15496 165 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 NDUFB6O95139 128 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 LY86O95711 162 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 IGHV3-48P01763 117 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 ANXA3P12429 323 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 SPNP16150 400 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 EDN2P20800 178 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 HOXA1P49639 335 aaPredicted RBP9.66□□□□□ -0.86
LSM5-201ENST00000223084 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 FAM209BQ5JX69 171 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 C11orf87Q6NUJ2 197 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 LGI3Q8N145 548 aa9.66□□□□□ -0.86
LSM5-201ENST00000223084 OR1L6Q8NGR2 347 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms