RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
RAB3D-201ENST00000222120 YPEL1O60688 119 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 ZNF253O75346 499 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 IGHG3P01860 377 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 TCF23Q7RTU1 214 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 YPEL2Q96QA6 119 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 IL19Q9UHD0 177 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 IGHV1-46P01743 117 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 C10orf113Q5VZT2 155 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 SPRY4Q9C004 299 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 A0A1W2PN81 502 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
RAB3D-201ENST00000222120 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 TREML4Q6UXN2 200 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 SSBP3Q9BWW4 388 aaPredicted RBP11.24□□□□□ -0.61
RAB3D-201ENST00000222120 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
RAB3D-201ENST00000222120 GCGP01275 180 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 MLANAQ16655 118 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
RAB3D-201ENST00000222120 HSBP1O75506 76 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
RAB3D-201ENST00000222120 SFRP2Q96HF1 295 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 PLXNB1O43157 2135 aa11.24□□□□□ -0.61
RAB3D-201ENST00000222120 C15orf62A8K5M9 175 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 MOSP00540 346 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
RAB3D-201ENST00000222120 PRO3102Q9H379 93 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 PTPRQQ9UMZ3 2332 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
RAB3D-201ENST00000222120 RAB4AP20338 218 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 OR2T6Q8NHC8 308 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 NPIPB11E5RHQ5 1161 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 CCL21O00585 134 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 IGHV2-5P01817 119 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 NUBP1P53384 320 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 PRRX1P54821 245 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 OR9G1Q8NH87 305 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 PAXXQ9BUH6 204 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
RAB3D-201ENST00000222120 FRYLO94915 3013 aa11.23□□□□□ -0.61
RAB3D-201ENST00000222120 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 HSBP1L1C9JCN9 74 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 TCF21O43680 179 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 SAA1P0DJI8 122 aaPredicted RBP11.22□□□□□ -0.61
RAB3D-201ENST00000222120 MMDQ15546 238 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 VAMP3Q15836 100 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 GNB4Q9HAV0 340 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 TNFSF13O75888 250 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 C1QL4Q86Z23 238 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 FAM208BQ5VWN6 2430 aa11.22□□□□□ -0.61
RAB3D-201ENST00000222120 C17orf100A8MU93 164 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 CHEK1O14757 476 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 MFAP2P55001 183 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 MBNL2Q5VZF2 373 aaKnown RBP11.21□□□□□ -0.61
RAB3D-201ENST00000222120 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 FAM57AQ8TBR7 257 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 GGTLC1Q9BX51 225 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 S4R3C0 116 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 A0A1B0GW64 132 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 CBY3A6NI87 242 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 ZNF134P52741 427 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 GNB2P62879 340 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 RNASEKQ6P5S7 137 aaKnown RBP11.21□□□□□ -0.61
RAB3D-201ENST00000222120 C11orf53Q8IXP5 236 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 PRR7Q8TB68 274 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 NDUFAF3Q9BU61 184 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 TMEM106BQ9NUM4 274 aa11.21□□□□□ -0.61
RAB3D-201ENST00000222120 C15orf61A6NNL5 157 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 FOXH1O75593 365 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.62
RAB3D-201ENST00000222120 RPL27AP46776 148 aaKnown RBP11.21□□□□□ -0.62
RAB3D-201ENST00000222120 ARF6P62330 175 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 PCP4P48539 62 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 DLX1P56177 255 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 EFNB3Q15768 340 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 PRR31Q5SQ13 230 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.62
RAB3D-201ENST00000222120 OCC1Q8TAD7 63 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms