RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SHISA9B4DS77 424 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 PPIAL4DF5H284 164 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 PPIAL4FP0DN26 164 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 RPL31P62899 125 aaKnown RBP18.11■□□□□ 0.49
CCDC9-201ENST00000221922 TEPPQ6URK8 271 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 UNQ6494/PRO21346Q6UXR6 183 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 TMEM204Q9BSN7 226 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 SLC35D1Q9NTN3 355 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 PPIAL4AQ9Y536 164 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 YTHDF2Q9Y5A9 579 aaKnown RBP18.11■□□□□ 0.49
CCDC9-201ENST00000221922 TRAPPC1Q9Y5R8 145 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 SCO2A0A1W2PP80 73 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 TMEM178BH3BS89 294 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 CT45A6P0DMU7 189 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 CT45A5P0DMU8 189 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 CT45A7P0DMV0 189 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 GCHFRP30047 84 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 CASP6P55212 293 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 EFNB3Q15768 340 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 GBGT1Q8N5D6 347 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 SGMS2Q8NHU3 365 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 SSMEM1Q8WWF3 244 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF257Q9Y2Q1 563 aa18.11■□□□□ 0.49
CCDC9-201ENST00000221922 MDFIC2A0A1B0GVS7 189 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 RPL29P47914 159 aaKnown RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 RHOBP62745 196 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 DMRTC2Q8IXT2 367 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 OR51B2Q9Y5P1 312 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 FNDC10F2Z333 226 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF600Q6ZNG1 722 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF833PQ6ZTB9 187 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 ZCCHC24Q8N2G6 241 aaKnown RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF664Q8N3J9 261 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 STPG3Q8N7X2 389 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 OCC1Q8TAD7 63 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 RNASE6Q93091 150 aaKnown RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 NOL4LQ96MY1 436 aaPredicted RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF714Q96N38 554 aa18.1■□□□□ 0.49
CCDC9-201ENST00000221922 SEPSECSQ9HD40 501 aaKnown RBP18.1■□□□□ 0.49
CCDC9-201ENST00000221922 PCNX1Q96RV3 2341 aa18.09■□□□□ 0.49
CCDC9-201ENST00000221922 A8MWP6 167 aa18.09■□□□□ 0.49
CCDC9-201ENST00000221922 CA7P43166 264 aa18.09■□□□□ 0.49
CCDC9-201ENST00000221922 TEX38Q6PEX7 206 aa18.09■□□□□ 0.49
CCDC9-201ENST00000221922 C11orf52Q96A22 123 aa18.09■□□□□ 0.49
CCDC9-201ENST00000221922 E7EQL1 145 aa18.08■□□□□ 0.49
CCDC9-201ENST00000221922 UPK2O00526 184 aa18.08■□□□□ 0.49
CCDC9-201ENST00000221922 RAB31Q13636 194 aa18.08■□□□□ 0.49
CCDC9-201ENST00000221922 TMEM106BQ9NUM4 274 aa18.08■□□□□ 0.49
CCDC9-201ENST00000221922 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.49
CCDC9-201ENST00000221922 CA2P00918 260 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 ATP5IP56385 69 aaPredicted RBP18.08■□□□□ 0.48
CCDC9-201ENST00000221922 YPEL3P61236 119 aaPredicted RBP18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PRR20EP86478 221 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PRR20CP86479 221 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PRR20DP86480 221 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PRR20BP86481 221 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PRR20AP86496 221 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 KLRB1Q12918 225 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 FBXL19-AS1Q494R0 122 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 OR10G8Q8NGN5 311 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 PLEKHA3Q9HB20 300 aa18.08■□□□□ 0.48
CCDC9-201ENST00000221922 APOA2P02652 100 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 PRCDQ00LT1 54 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 SPATA31B1PQ5VZV4 182 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 NEUROG1Q92886 237 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 BET1LQ9NYM9 111 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 J3QR06 171 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 NDUFB3O43676 98 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 MT-CO2P00403 227 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 LRRC10Q5BKY1 277 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 LY96Q9Y6Y9 160 aa18.07■□□□□ 0.48
CCDC9-201ENST00000221922 TRAV9-1A0A075B6T8 112 aa18.06■□□□□ 0.48
CCDC9-201ENST00000221922 ST6GALNAC3Q8NDV1 305 aa18.06■□□□□ 0.48
CCDC9-201ENST00000221922 OSR1Q8TAX0 266 aaPredicted RBP18.06■□□□□ 0.48
CCDC9-201ENST00000221922 CCL17Q92583 94 aa18.06■□□□□ 0.48
CCDC9-201ENST00000221922 HINT2Q9BX68 163 aa18.06■□□□□ 0.48
CCDC9-201ENST00000221922 DYNLRB1Q9NP97 96 aa18.06■□□□□ 0.48
CCDC9-201ENST00000221922 C9JCJ5 164 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 AREGP15514 252 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 TMEM200BQ69YZ2 307 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 ARL2-SNX15V9GYD0 113 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 NBEAQ8NFP9 2946 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 SPTBN4Q9H254 2564 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 ZNF705GA8MUZ8 300 aaPredicted RBP18.05■□□□□ 0.48
CCDC9-201ENST00000221922 TNFRSF13BO14836 293 aaPredicted RBP18.05■□□□□ 0.48
CCDC9-201ENST00000221922 FOXH1O75593 365 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 IGKV1-16P04430 117 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 CD3EP07766 207 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 LINC00869P0C866 280 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 MRPL41Q8IXM3 137 aaKnown RBP18.05■□□□□ 0.48
CCDC9-201ENST00000221922 OR5B3Q8NH48 314 aa18.05■□□□□ 0.48
CCDC9-201ENST00000221922 K7EN84 100 aa18.04■□□□□ 0.48
CCDC9-201ENST00000221922 CCL3L1P16619 93 aa18.04■□□□□ 0.48
CCDC9-201ENST00000221922 APOBEC3AP31941 199 aaPredicted RBP18.04■□□□□ 0.48
CCDC9-201ENST00000221922 FAM71F2Q6NXP2 309 aa18.04■□□□□ 0.48
CCDC9-201ENST00000221922 C8orf31Q8N9H6 132 aa18.04■□□□□ 0.48
CCDC9-201ENST00000221922 UHRF2Q96PU4 802 aa18.04■□□□□ 0.48
CCDC9-201ENST00000221922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.03■□□□□ 0.48
CCDC9-201ENST00000221922 IGFBP2P18065 325 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 CHRNB4P30926 498 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms