RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 GTF3AQ92664 365 aaKnown RBP7.89□□□□□ -1.15
CCDC113-201ENST00000219299 COA4Q9NYJ1 87 aa7.89□□□□□ -1.15
CCDC113-201ENST00000219299 NCOA6Q14686 2063 aaPredicted RBP7.89□□□□□ -1.15
CCDC113-201ENST00000219299 A8MWL6 223 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 APELAP0DMC3 54 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 FOLR2P14207 255 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 NPY1RP25929 384 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 C5orf66Q9H5L9 145 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 MC5RP33032 325 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 HERPUD1Q15011 391 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 OR8I2Q8N0Y5 310 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 PNKDQ8N490 385 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 MYOZ3Q8TDC0 251 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 TAF15Q92804 592 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC113-201ENST00000219299 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 PARLQ9H300 379 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 IDI2-AS1Q9NZ38 188 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 MYO9AB2RTY4 2548 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 CDH23Q9H251 3354 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 IGKV1-12A0A0C4DH73 117 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 A0A1B0GV72 72 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 E7EQL1 145 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 KBTBD11O94819 623 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 IGKV1D-12P01611 117 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 ORM1P02763 201 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CCDC113-201ENST00000219299 NMUP48645 174 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 LYZP61626 148 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 CTAG1AP78358 180 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 ZNF124Q15973 351 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 MBNL2Q5VZF2 373 aaKnown RBP7.88□□□□□ -1.15
CCDC113-201ENST00000219299 Q8NA96 180 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 PMCHL2Q9BQD1 86 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 AP5S1Q9NUS5 200 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 A0A087WWC5 75 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 A6NJY4 79 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 C12orf77C9JDV5 145 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 H3BVH4 76 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 AMY1AP04745 511 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 TCTAP57738 103 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 PRB3Q04118 309 aaPredicted RBP7.88□□□□□ -1.15
CCDC113-201ENST00000219299 NDUFAF3Q9BU61 184 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 NPVFQ9HCQ7 196 aa7.88□□□□□ -1.15
CCDC113-201ENST00000219299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SPSB4Q96A44 273 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 RBM14Q96PK6 669 aaKnown RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SELLP14151 372 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 CCL3L1P16619 93 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 OR13A1Q8NGR1 328 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 BTF3P20290 206 aaKnown RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 ZNF137PP52743 207 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 ZNF788Q6ZQV5 615 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 RNF144BQ7Z419 303 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 OR1L8Q8NGR8 309 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 OR9G1Q8NH87 305 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 TM2D1Q9BX74 207 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 PLSCR2Q9NRY7 297 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 GNG7O60262 68 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 ARL6IP6Q8N6S5 226 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 PXMP4Q9Y6I8 212 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 HIVEP2P31629 2446 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 F8VVB4 439 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 F8VWA3 439 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SLC35B1P78383 322 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 CXorf66Q5JRM2 361 aaPredicted RBP7.87□□□□□ -1.15
CCDC113-201ENST00000219299 Q8WTZ3 238 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 SMIM8Q96KF7 97 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
CCDC113-201ENST00000219299 FAM90A26D6RGX4 464 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 UBE2CO00762 179 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 VENTXO95231 258 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 FAM106CPP0CH98 169 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 QTRT1Q9BXR0 403 aaKnown RBP7.86□□□□□ -1.15
CCDC113-201ENST00000219299 USP9XQ93008 2570 aaPredicted RBP7.86□□□□□ -1.15
CCDC113-201ENST00000219299 F5H697 171 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 HLA-DRB1P01911 266 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 RPL30P62888 115 aaKnown RBP7.86□□□□□ -1.15
CCDC113-201ENST00000219299 RELBQ01201 579 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 CLEC7AQ9BXN2 247 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 UFC1Q9Y3C8 167 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 OR4C46A6NHA9 309 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 SRRM5B3KS81 715 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 MLNRO43193 412 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 HPRT1P00492 218 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 DLX1P56177 255 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 ERASQ7Z444 233 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 FAM169BQ8N8A8 192 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 C7orf69Q9H7B7 122 aa7.86□□□□□ -1.15
CCDC113-201ENST00000219299 CEACAM18A8MTB9 384 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms