RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PRSS57Q6UWY2 283 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 SRSF8Q9BRL6 282 aaKnown RBP12.2□□□□□ -0.46
PTPRA-201ENST00000216877 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
PTPRA-201ENST00000216877 A0A096LPE4 126 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 A0A1W2PPZ6 126 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 C9orf118A6NHY6 69 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 OR5AL1P0C617 328 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 STAG3L2P0CL84 134 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 RHBDD2Q6NTF9 364 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 TPRX1Q8N7U7 411 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 VSTM2AQ8TAG5 236 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 NPIPB13A6NJU9 1138 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 NPIPB4C9JG80 1138 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 MT-CO3P00414 261 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 VKORC1L1Q8N0U8 176 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 TEX45Q8NA69 505 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 DOCK10Q96BY6 2186 aa12.2□□□□□ -0.46
PTPRA-201ENST00000216877 CATR1Q13166 79 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 ADAMTSL5Q6ZMM2 481 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 DUSP13Q9UII6 198 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 C17orf98A8MV24 154 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
PTPRA-201ENST00000216877 ACP7Q6ZNF0 438 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 OR52E5Q8NH55 327 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 OR4A16Q8NH70 328 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 ACACAQ13085 2346 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 CDIPTO14735 213 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 FGF12P61328 243 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 POM121L2Q96KW2 1035 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 WDR83OSQ9Y284 106 aa12.19□□□□□ -0.46
PTPRA-201ENST00000216877 REG1AP05451 166 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 PSG3Q16557 428 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 ASCL4Q6XD76 172 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 DUX1O43812 170 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 SEC11AP67812 179 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 GUSBP1Q15486 140 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 TCF24Q7RTU0 167 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 SPEM1Q8N4L4 309 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 SMRP1Q8NCR6 262 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 B4GALT7Q9UBV7 327 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 ZFHX2Q9C0A1 2572 aaPredicted RBP12.18□□□□□ -0.46
PTPRA-201ENST00000216877 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 RPL30P62888 115 aaKnown RBP12.18□□□□□ -0.46
PTPRA-201ENST00000216877 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 PET117Q6UWS5 81 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
PTPRA-201ENST00000216877 CELA3AP09093 270 aa12.17□□□□□ -0.46
PTPRA-201ENST00000216877 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
PTPRA-201ENST00000216877 LINC00696Q6ZRV3 163 aa12.17□□□□□ -0.46
PTPRA-201ENST00000216877 C9orf172C9J069 976 aa12.17□□□□□ -0.46
PTPRA-201ENST00000216877 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
PTPRA-201ENST00000216877 ATRXP46100 2492 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 TRGV10A0A0A0MS01 117 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 IGLV3-1P01715 115 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 FCER1GP30273 86 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 EFNB3Q15768 340 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 RABAC1Q9UI14 185 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 POLEQ07864 2286 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 COL6A3P12111 3177 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-201ENST00000216877 K7EMI3 77 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 CNIH1O95406 144 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 P04436 131 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 YPEL5P62699 121 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 CD300EQ496F6 205 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-201ENST00000216877 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 OR2V2Q96R30 315 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 FAM173AQ9BQD7 235 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 DLL3Q9NYJ7 618 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 A0A1W2PPC4 97 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 NTF4P34130 210 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-201ENST00000216877 AAED1Q7RTV5 226 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 FGFBP3Q8TAT2 258 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 MGST2Q99735 147 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 GGTLC1Q9BX51 225 aa12.16□□□□□ -0.46
PTPRA-201ENST00000216877 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 FCGR3BO75015 233 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 LTBRP36941 435 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 SCRT2Q9NQ03 307 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 A1L4Q6 167 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 F2RL2O00254 374 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 SPATA46Q5T0L3 261 aa12.15□□□□□ -0.46
PTPRA-201ENST00000216877 FGF21Q9NSA1 209 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms