RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TEX45Q8NA69 505 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 PAX4O43316 350 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 CTGFP29279 349 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 NR2C2APQ86WQ0 139 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TTTY12Q9BZ98 90 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 ARID2Q68CP9 1835 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 BCORQ6W2J9 1755 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 PLA2G10O15496 165 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 ESDP10768 282 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 HMGA2P52926 109 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 EFNB1P98172 346 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 USP54Q70EL1 1684 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 RBMY1FQ15415 496 aaKnown RBP12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 GPR132Q9UNW8 380 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
SPTLC2-201ENST00000216484 NDUFA2O43678 99 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 NMBP08949 121 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 CA7P43166 264 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 EDIL3O43854 480 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF385AQ96PM9 386 aaKnown RBP12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 UPK3AO75631 287 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 CCL4P13236 92 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 PSG4Q00888 419 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 LAMTOR2Q9Y2Q5 125 aa12.46□□□□□ -0.41
SPTLC2-201ENST00000216484 IGLV3-25P01717 112 aa12.46□□□□□ -0.42
SPTLC2-201ENST00000216484 PNKDQ8N490 385 aa12.46□□□□□ -0.42
SPTLC2-201ENST00000216484 GFRA3O60609 400 aa12.46□□□□□ -0.42
SPTLC2-201ENST00000216484 PDLIM4P50479 330 aa12.46□□□□□ -0.42
SPTLC2-201ENST00000216484 CLEC19AQ6UXS0 136 aa12.46□□□□□ -0.42
SPTLC2-201ENST00000216484 IGHV1OR15-9A0A0B4J2B8 117 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 A0A0G2JLM5 398 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 SIRT4Q9Y6E7 314 aaPredicted RBP12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 LOXL4Q96JB6 756 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 WDYHV1Q96HA8 205 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 RPRMQ9NS64 109 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 IFNL4K9M1U5 179 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
SPTLC2-201ENST00000216484 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 MORN3Q6PF18 240 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 IGKCP01834 107 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 P2RY6Q15077 328 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 Q9H3A6 140 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 IL11P20809 199 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 FDCSPQ8NFU4 85 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 SMIM8Q96KF7 97 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 NCR2O95944 276 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 PTGDSP41222 190 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 PRB3Q04118 309 aaPredicted RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 C2orf68Q2NKX9 166 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 CHCHD5Q9BSY4 110 aa12.44□□□□□ -0.42
SPTLC2-201ENST00000216484 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 DRD3P35462 400 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 HCFC1P51610 2035 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 LTBRP36941 435 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 KCNK17Q96T54 332 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 C2orf82Q6UX34 121 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 FAM57AQ8TBR7 257 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 C5orf66Q9H5L9 145 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 ANAPC10Q9UM13 185 aa12.43□□□□□ -0.42
SPTLC2-201ENST00000216484 SCN10AQ9Y5Y9 1956 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 IGFBP6P24592 240 aaPredicted RBP12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 PSMG4Q5JS54 123 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 DLL3Q9NYJ7 618 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 FOXH1O75593 365 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 VENTXO95231 258 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 SRD5A1P18405 259 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 TMEM186Q96B77 213 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 GVINP1Q7Z2Y8 2422 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 C1QTNF12Q5T7M4 302 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 Q6AWC8 147 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 GAGE2AQ6NT46 116 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 MSRB3Q8IXL7 192 aa12.42□□□□□ -0.42
SPTLC2-201ENST00000216484 IGHV1-69-2A0A0G2JMI3 117 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 CD5LO43866 347 aa12.41□□□□□ -0.42
SPTLC2-201ENST00000216484 SEC11AP67812 179 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms