RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 REG1BP48304 166 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 RPL23P62829 140 aaKnown RBP13.89□□□□□ -0.19
PHGDH-211ENST00000641213 C8orf31Q8N9H6 132 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 LINC01560Q8TB33 94 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 HARBI1Q96MB7 349 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 C12orf57Q99622 126 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 KCNIP2Q9NS61 270 aa13.89□□□□□ -0.19
PHGDH-211ENST00000641213 AP4M1O00189 453 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 STAG3L2P0CL84 134 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 STAG3L3P0CL85 134 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 CA7P43166 264 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 CASP6P55212 293 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 B2MP61769 119 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 DIAPH2-AS1Q14236 149 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 BSXQ3C1V8 233 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 TMEM177Q53S58 311 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 LINC00311Q8N616 119 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 OR10X1Q8NGY0 326 aa13.88□□□□□ -0.19
PHGDH-211ENST00000641213 FNDC10F2Z333 226 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 ARL14EPLP0DKL9 152 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 NPPCP23582 126 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 UBE2G2P60604 165 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 TMEM155Q4W5P6 130 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 STPG3Q8N7X2 389 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 OR5B3Q8NH48 314 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 FAM90A27PA6NNH2 459 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 RPL29P47914 159 aaKnown RBP13.87□□□□□ -0.19
PHGDH-211ENST00000641213 RAB31Q13636 194 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 KIAA0141Q14154 515 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-211ENST00000641213 FAM71F2Q6NXP2 309 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 SPNS3Q6ZMD2 512 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 TMEM186Q96B77 213 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 FLYWCH2Q96CP2 140 aaKnown RBP13.87□□□□□ -0.19
PHGDH-211ENST00000641213 NABP2Q9BQ15 211 aa13.87□□□□□ -0.19
PHGDH-211ENST00000641213 CXorf1O96002 111 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 IGFBP2P18065 325 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 GRNP28799 593 aaKnown RBP13.86□□□□□ -0.19
PHGDH-211ENST00000641213 ATP5G3P48201 142 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 MEOX2P50222 304 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 UCNP55089 124 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 C2orf83Q53S99 150 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 CST9LP1Q5W188 147 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 C16orf82Q7Z2V1 217 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 FAM210BQ96KR6 192 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 A0A087X0M5 115 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 A0A1B0GX30 115 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 PDE6DO43924 150 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 CHRNB4P30926 498 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 OR10W1Q8NGF6 305 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 OR51G1Q8NGK1 321 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 FAM122AQ96E09 287 aa13.86□□□□□ -0.19
PHGDH-211ENST00000641213 ATP5IP56385 69 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-211ENST00000641213 GNB1P62873 340 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PRR20EP86478 221 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PRR20CP86479 221 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PRR20DP86480 221 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PRR20BP86481 221 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PRR20AP86496 221 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 PDPNQ86YL7 162 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 OR4C13Q8NGP0 309 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 SEPSECSQ9HD40 501 aaKnown RBP13.85□□□□□ -0.19
PHGDH-211ENST00000641213 NDUFA4L2Q9NRX3 87 aa13.85□□□□□ -0.19
PHGDH-211ENST00000641213 TRBV24-1A0A075B6N3 115 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 CCL21O00585 134 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 SIAH2O43255 324 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 LINC00869P0C866 280 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 IGHV1-8P0DP01 117 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 RNASE2P10153 161 aaKnown RBP13.84□□□□□ -0.19
PHGDH-211ENST00000641213 RPL8P62917 257 aaKnown RBP13.84□□□□□ -0.19
PHGDH-211ENST00000641213 NHLH1Q02575 133 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 SPATA31B1PQ5VZV4 182 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 MOB3BQ86TA1 216 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 C11orf42Q8N5U0 333 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 OR1L8Q8NGR8 309 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 COMMD5Q9GZQ3 224 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 VENTXO95231 258 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 TRGC2P03986 189 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 USF1P22415 310 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-211ENST00000641213 ZNF137PP52743 207 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 RHOBP62745 196 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 TMEM144Q7Z5S9 345 aa13.84□□□□□ -0.19
PHGDH-211ENST00000641213 IGF2RP11717 2491 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 LYNX1G3V0Z9 82 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 S100A8P05109 93 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 LYNX1P0DP58 116 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 MUC15Q8N387 334 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 ST6GALNAC3Q8NDV1 305 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 TMEM167AQ8TBQ9 72 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 IGKV1OR2-108A0A075B7D4 117 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 PCP4L1A6NKN8 68 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 E7EUB6 86 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 F6UZH7 168 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 IGLV2-23P01705 113 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms