RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 CGAP01215 116 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 TFF3Q07654 80 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 SAPCD1Q5SSQ6 148 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 TMEM70Q9BUB7 260 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 C1QTNF5Q9BXJ0 243 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 CXorf65A6NEN9 183 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 PSMG3Q9BT73 122 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 RPRMQ9NS64 109 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 PSMB11A5LHX3 300 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 SOD3P08294 240 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 NBEAP1P0C6P0 100 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 UQCR10Q9UDW1 63 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 GCSAMLQ5JQS6 135 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 SLC25A34Q6PIV7 304 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 KBTBD11-OT1A0A1B0GTJ5 212 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 LTBRP36941 435 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
HNRNPU-226ENST00000640218 GPR183P32249 361 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 TEX45Q8NA69 505 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 AICDAQ9GZX7 198 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 M0R381 172 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 NAT1P18440 290 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 HBBP68871 147 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 WDR82Q6UXN9 313 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 WDYHV1Q96HA8 205 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 PDCD11Q14690 1871 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 CDKN1AP38936 164 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 ITLN2Q8WWU7 325 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 NPIPB9F8W1W9 429 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 EFEMP2O95967 443 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 UMODP07911 640 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 PRB3Q04118 309 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 PSME4Q14997 1843 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 CBLN1P23435 193 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 ABCA7Q8IZY2 2146 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 RCC1LQ96I51 464 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 IMMP1LQ96LU5 166 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 MRPL20Q9BYC9 149 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 SUMO2P61956 95 aaKnown RBP12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
HNRNPU-226ENST00000640218 CD8AP01732 235 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 CLEC19AQ6UXS0 136 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 ERASQ7Z444 233 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 CEP290O15078 2479 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 PLP1P60201 277 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 TRAV24A0A0B4J272 114 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 REPIN1Q9BWE0 567 aaKnown RBP12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 C7orf69Q9H7B7 122 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 NUTF2P61970 127 aaKnown RBP12.4□□□□□ -0.42
HNRNPU-226ENST00000640218 CA7P43166 264 aa12.4□□□□□ -0.43
HNRNPU-226ENST00000640218 FOXA3P55318 350 aaPredicted RBP12.4□□□□□ -0.43
HNRNPU-226ENST00000640218 ESPL1Q14674 2120 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 A0A0G2JK05 382 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 K7ERU9 68 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 C21orf62Q9NYP8 219 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 IFITM2Q01629 132 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 RTN4RL2Q86UN3 420 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 BEX4Q9NWD9 120 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 A0A0G2JLM5 398 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 GPX4P36969 197 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 JOSD1Q15040 202 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-226ENST00000640218 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 IQCF6A8MYZ5 107 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 NPIPB7O75200 414 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 SCO2A0A1W2PP80 73 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 MPTX1A8MV57 137 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 ZP1P60852 638 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 SLC17A3O00476 420 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 C21orf62-AS1Q17RA5 79 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 ASIPP42127 132 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 LHX2P50458 406 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 DUX3Q96PT4 197 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms