RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-245	ENST00000639702		H3BTX0	84 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702		H7C2G1	150 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	RRH	O14718	337 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	TGFA	P01135	160 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	IGHV3-23	P01764	117 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	COLCA1	Q6ZS62	124 aa		10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.3	□□□□□ -0.76
RBM39-245	ENST00000639702	GREB1L	Q9C091	1923 aa	Predicted RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	TRAV9-1	A0A075B6T8	112 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	PEX7	O00628	323 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	SCGB1A1	P11684	91 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	IGFBP3	P17936	291 aa	Predicted RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	ZNF385C	Q66K41	422 aa	Predicted RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	BRCA1	P38398	1863 aa	Known RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	COTL1	Q14019	142 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	GAGE10	A6NGK3	116 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	GPR183	P32249	361 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	PVRIG	Q6DKI7	326 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	OR52E5	Q8NH55	327 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	C7orf71	A4D174	169 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702		H3BRM9	83 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	IGFBP2	P18065	325 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	SUMO2	P61956	95 aa	Known RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	NHLRC3	Q5JS37	347 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	CLEC19A	Q6UXS0	136 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	TMEM136	Q6ZRR5	245 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	CIART	Q8N365	385 aa	Predicted RBP	10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	RPRM	Q9NS64	109 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	PCM1	Q15154	2024 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702		K7ERU9	68 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	PSMG4	Q5JS54	123 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	WDR82	Q6UXN9	313 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	SLC50A1	Q9BRV3	221 aa		10.29	□□□□□ -0.76
RBM39-245	ENST00000639702	UPK2	O00526	184 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	NTN3	O00634	580 aa	Predicted RBP	10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	IL18BP	O95998	194 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	IGKV3-20	P01619	116 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	TMEM190	Q8WZ59	177 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	GTF3A	Q92664	365 aa	Known RBP	10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	FAM131C	Q96AQ9	280 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	WNT10A	Q9GZT5	417 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	IL36B	Q9NZH7	164 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	CCL1	P22362	96 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	TNFRSF14	Q92956	283 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	OTOR	Q9NRC9	128 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	ZNF236	Q9UL36	1845 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	ATP5L	O75964	103 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	TRBV6-7	A0A0A0MS04	114 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	FAM90A9P	A6NNJ1	464 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702		C9JCJ5	164 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	TBR1	Q16650	682 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	LRTM2	Q8N967	370 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	TMEM133	Q9H2Q1	129 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	ANKRD36	A6QL64	1941 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	FAM201A	Q5SY85	155 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	LEMD1	Q68G75	181 aa		10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	MRPL13	Q9BYD1	178 aa	Known RBP	10.28	□□□□□ -0.76
RBM39-245	ENST00000639702	CACNA1C	Q13936	2221 aa		10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	DUSP14	O95147	198 aa	Known RBP	10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	RCC1L	Q96I51	464 aa	Known RBP	10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	PRELID3A	Q96N28	172 aa		10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	AICDA	Q9GZX7	198 aa		10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.27	□□□□□ -0.76
RBM39-245	ENST00000639702	TRAV24	A0A0B4J272	114 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702		A0A1B0GTI1	187 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	HINT1	P49773	126 aa	Predicted RBP	10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	KCNS1	Q96KK3	526 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	RPP21	Q9H633	154 aa	Known RBP	10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	FBLN5	Q9UBX5	448 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	IGHV3-48	P01763	117 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	CELA3B	P08861	270 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	WBP1	Q96G27	269 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	LINC01587	Q99440	93 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	ZNF497	Q6ZNH5	498 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	SPACA3	Q8IXA5	215 aa		10.27	□□□□□ -0.77
RBM39-245	ENST00000639702	LAIR2	Q6ISS4	152 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	OR11H4	Q8NGC9	324 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	FLVCR1-AS1	Q8TAF5	88 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	KLK15	Q9H2R5	256 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	IGKV3OR2-268	A0A0C4DH90	116 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	CGA	P01215	116 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	CDKN1A	P38936	164 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	CDX1	P47902	265 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	CASP8AP2	Q9UKL3	1982 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	SAA2-SAA4	A0A096LPE2	208 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	IGHV3-35	A0A0C4DH35	117 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	IGHV3-66	A0A0C4DH42	116 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	SAA1	P0DJI8	122 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	SAA2	P0DJI9	122 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	TIMP3	P35625	211 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	TFF3	Q07654	80 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	METRN	Q9UJH8	293 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	MPTX1	A8MV57	137 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	CMC4	P56277	68 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	C18orf12	Q96KH6	178 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	ATG2B	Q96BY7	2078 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	C15orf61	A6NNL5	157 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	TCF23	Q7RTU1	214 aa		10.26	□□□□□ -0.77
RBM39-245	ENST00000639702	ZNF414	Q96IQ9	312 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms