RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 OR1N2Q8NGR9 330 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 OR4A16Q8NH70 328 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
COLCA2-206ENST00000638573 SEC22AQ96IW7 307 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 MS4A10Q96PG2 267 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 MCRIP2Q9BUT9 160 aaKnown RBP12.69□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM222Q9H0R3 208 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 FKBP11Q9NYL4 201 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 TNCP24821 2201 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 TRAV3A0A0B4J244 114 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 PIGBOS1A0A0B4J2F0 54 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 TRGV3P03979 118 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 CCR6P51684 374 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 DCUN1D4Q92564 292 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 UBE2E2Q96LR5 201 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 QTRT1Q9BXR0 403 aaKnown RBP12.68□□□□□ -0.38
COLCA2-206ENST00000638573 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
COLCA2-206ENST00000638573 IGHV4OR15-8A0A075B7B6 117 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 A0A087WW49 117 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 HMX3A6NHT5 357 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 C15orf61A6NNL5 157 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 LYRM1O43325 122 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 DHFRP00374 187 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 IL6RP08887 468 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-206ENST00000638573 OR2B8PP59922 312 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 SRPXP78539 464 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 OR1L8Q8NGR8 309 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-206ENST00000638573 RBPMSQ93062 196 aaKnown RBP12.67□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM230Q96A57 120 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 SRSF8Q9BRL6 282 aaKnown RBP12.67□□□□□ -0.38
COLCA2-206ENST00000638573 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
COLCA2-206ENST00000638573 TEX22C9J3V5 150 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 NDUFB6O95139 128 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 CDS2O95674 445 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 MYOD1P15172 320 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 VAMP1P23763 118 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 CD69Q07108 199 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 ZNF616Q08AN1 781 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM128Q5BJH2 165 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM268Q5VZI3 342 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 HSD17B13Q7Z5P4 300 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-206ENST00000638573 HAPLN4Q86UW8 402 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 PDCD10Q9BUL8 212 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 ZNF257Q9Y2Q1 563 aa12.66□□□□□ -0.38
COLCA2-206ENST00000638573 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 NPIPB5A8MRT5 1133 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 MECP2P51608 486 aaKnown RBP12.65□□□□□ -0.38
COLCA2-206ENST00000638573 FAM219AQ8IW50 185 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 LSM10Q969L4 123 aaKnown RBP12.65□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 ASCL2Q99929 193 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 B9D2Q9BPU9 175 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
COLCA2-206ENST00000638573 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
COLCA2-206ENST00000638573 TEX50A0A1B0GTY4 177 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 E7EUB6 86 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 CYB5BO43169 146 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 BRI3O95415 125 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 DEFA4P12838 97 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 PSMB6P28072 239 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
COLCA2-206ENST00000638573 RUNX1Q01196 453 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 TMEM187Q14656 261 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 MZT2BQ6NZ67 158 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 SELENOHQ8IZQ5 122 aaKnown RBP12.64□□□□□ -0.39
COLCA2-206ENST00000638573 LGI3Q8N145 548 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 TMEM56-RWDD3S4R434 201 aa12.64□□□□□ -0.39
COLCA2-206ENST00000638573 COL7A1Q02388 2944 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 PLA2G10O15496 165 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 UPK1BO75841 260 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 AREGP15514 252 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 BTCP35070 178 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
COLCA2-206ENST00000638573 LHFPL5Q8TAF8 219 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 USMG5Q96IX5 58 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 NDUFA4L2Q9NRX3 87 aa12.63□□□□□ -0.39
COLCA2-206ENST00000638573 A0A1B0GW64 132 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 FAM223BA6NKX1 122 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 OVOL1O14753 267 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 LY86O95711 162 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 REG1AP05451 166 aa12.62□□□□□ -0.39
COLCA2-206ENST00000638573 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms