RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SPACA3Q8IXA5 215 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 PARD6GQ9BYG4 376 aaPredicted RBP15.07■□□□□ 0
CACNA1A-227ENST00000636549 C21orf62Q9NYP8 219 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 NPIPB8E9PQR5 432 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 NPIPB9F8W1W9 429 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 NPIPB7O75200 414 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 LINC00614P0C842 121 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 CBLN1P23435 193 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 AKAP11Q9UKA4 1901 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 IGKV1-8A0A0C4DH67 115 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 HBDP02042 147 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 CD28P10747 220 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 LINC00477Q96M19 166 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 DPM3Q9P2X0 92 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 C9orf106Q8NAJ2 232 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 C19orf24Q9BVV8 132 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 UNC13CQ8NB66 2214 aa15.07■□□□□ 0
CACNA1A-227ENST00000636549 HOXA3O43365 443 aaPredicted RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 RPS20P60866 119 aaKnown RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 RPL32P62910 135 aaKnown RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 SEPSECSQ9HD40 501 aaKnown RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 LHFPL6Q9Y693 200 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 DEFB130BP0DP73 79 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 DEFB130AP0DP74 79 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 IGHV1-2P23083 117 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 ZNF48Q96MX3 618 aaPredicted RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 SAMD13Q5VXD3 122 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 WDR34Q96EX3 536 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 ALX4Q9H161 411 aaPredicted RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 H7C1H1 209 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 ZXDCQ2QGD7 858 aaPredicted RBP15.06■□□□□ 0
CACNA1A-227ENST00000636549 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 TRGV1A0A0A0MS02 117 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 GPR132Q9UNW8 380 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 LILRA1O75019 489 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
CACNA1A-227ENST00000636549 A0A087WX48 190 aa15.05■□□□□ 0
CACNA1A-227ENST00000636549 SCO2A0A1W2PP80 73 aa15.05■□□□□ 0
CACNA1A-227ENST00000636549 SUMO4Q6EEV6 95 aa15.05■□□□□ 0
CACNA1A-227ENST00000636549 FAM57AQ8TBR7 257 aa15.05■□□□□ 0
CACNA1A-227ENST00000636549 MIXL1Q9H2W2 232 aa15.05■□□□□ 0
CACNA1A-227ENST00000636549 TMEM50AO95807 157 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.05■□□□□ -0
CACNA1A-227ENST00000636549 ZNF414Q96IQ9 312 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 A0A096LPF7 62 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 TRAV14DV4A0A0A6YYC5 116 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 LY6HO94772 140 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 NGFRP08138 427 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 HMGCLL1Q8TB92 370 aa15.05■□□□□ -0
CACNA1A-227ENST00000636549 ZNF729A6NN14 1252 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 THBDP07204 575 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 IL6RP08887 468 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 ZNF474Q6S9Z5 364 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 ACP7Q6ZNF0 438 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 FAM19A2Q8N3H0 131 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 TMEM252Q8N6L7 170 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 NEU4Q8WWR8 484 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 C1orf53Q5VUE5 145 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 C8orf82Q6P1X6 216 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 MBD3L1Q8WWY6 194 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 SCN7AQ01118 1682 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 FGF9P31371 208 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 HIST1H4AP62805 103 aaKnown RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 VMO1Q7Z5L0 202 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 CA1P00915 261 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 UMODP07911 640 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 ANKRD31Q8N7Z5 1873 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 WFDC6Q9BQY6 131 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 COL25A1Q9BXS0 654 aaPredicted RBP15.04■□□□□ -0
CACNA1A-227ENST00000636549 VCX2Q9H322 139 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 CDC42EP3Q9UKI2 254 aa15.04■□□□□ -0
CACNA1A-227ENST00000636549 C7orf66A4D0T2 115 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 FOLR2P14207 255 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 TMEM222Q9H0R3 208 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 STRCQ7RTU9 1775 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 SRSF6Q13247 344 aaKnown RBP15.03■□□□□ -0
CACNA1A-227ENST00000636549 IGFL4Q6B9Z1 124 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 SSBP4Q9BWG4 385 aaPredicted RBP15.03■□□□□ -0
CACNA1A-227ENST00000636549 A0A1W2PPC1 479 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 RHOGP84095 191 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 EGR4Q05215 589 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 SLC25A47Q6Q0C1 308 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 V9GYH0 126 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 SVILO95425 2214 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 ZNF250P15622 560 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 ZNF146Q15072 292 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 TMEM127O75204 238 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 CEACAM1P13688 526 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 PKIAP61925 76 aa15.03■□□□□ -0
CACNA1A-227ENST00000636549 RPL15P61313 204 aaKnown RBP15.02■□□□□ -0
CACNA1A-227ENST00000636549 Q9H3A6 140 aa15.02■□□□□ -0
CACNA1A-227ENST00000636549 JPT1Q9UK76 154 aa15.02■□□□□ -0
CACNA1A-227ENST00000636549 ZNF646O15015 1829 aaPredicted RBP15.02■□□□□ -0
CACNA1A-227ENST00000636549 ZIC4Q8N9L1 334 aa15.02■□□□□ -0
CACNA1A-227ENST00000636549 P2RY4P51582 365 aa15.02□□□□□ -0.01
CACNA1A-227ENST00000636549 CBLN4Q9NTU7 201 aa15.02□□□□□ -0.01
CACNA1A-227ENST00000636549 IGHV2OR16-5A0A0B4J2B6 119 aa15.02□□□□□ -0.01
CACNA1A-227ENST00000636549 MIR17HGQ75NE6 70 aa15.02□□□□□ -0.01
CACNA1A-227ENST00000636549 LAMTOR3Q9UHA4 124 aa15.02□□□□□ -0.01
CACNA1A-227ENST00000636549 SLC25A15Q9Y619 301 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms