RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 METRNQ9UJH8 293 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 CCL26Q9Y258 94 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 RICTORQ6R327 1708 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PPIAL4CA0A0B4J2A2 164 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 K7ESM1 405 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 CLDN14O95500 239 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 LINC00614P0C842 121 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PPIAL4GP0DN37 164 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 LTBRP36941 435 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 MAGEA5P43359 124 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 WDR82Q6UXN9 313 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 STPG2Q8N412 459 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 C18orf15Q96N68 181 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 MMP25Q9NPA2 562 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 GLRXP35754 106 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 COL10A1Q03692 680 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 CIARTQ8N365 385 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 WFDC11Q8NEX6 87 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 ASCL2Q99929 193 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 RSPO3Q9BXY4 272 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 IL25Q9H293 177 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 FGF20Q9NP95 211 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PLXNA2O75051 1894 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 A0A1W2PRX2 142 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 MMP23AO75900 390 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 MPZL1O95297 269 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 KLK2P20151 261 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 CRYBB3P26998 211 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 TMEM50BP56557 158 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 PRSS42Q7Z5A4 293 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 ATG4DQ86TL0 474 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-212ENST00000636194 RNF114Q9Y508 228 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 TRAV2A0A0B4J234 112 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 ARL14EPLP0DKL9 152 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 SS18Q15532 418 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 IFI27L2Q9H2X8 130 aa5.19□□□□□ -1.58
SCN1A-212ENST00000636194 IGHV3OR15-7A0A075B7D8 119 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 FAM90A26D6RGX4 464 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 MMP16P51512 607 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 ASB10Q8WXI3 467 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 LOXL4Q96JB6 756 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 PRR33A8MZF0 331 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 CD7P09564 240 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 HOXB1P14653 301 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-212ENST00000636194 GNLYP22749 145 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
SCN1A-212ENST00000636194 FOXB2Q5VYV0 432 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 NOTCH4Q99466 2003 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 PLPP3O14495 311 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 TRACP01848 142 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 CT55Q8WUE5 264 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 GTSF1LQ9H1H1 148 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 WDR54Q9H977 334 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 FOXJ2Q9P0K8 574 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 CD28P10747 220 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 HOXB3P14651 431 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-212ENST00000636194 SLC25A35Q3KQZ1 300 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF585BQ52M93 769 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 OR5P3Q8WZ94 311 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 CHST5Q9GZS9 411 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 NEU3Q9UQ49 428 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 A0A1W2PP11 408 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF561-AS1K7EIQ3 104 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 CCL2P13500 99 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 PTGDSP41222 190 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 GFERP55789 205 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 NHLRC3Q5JS37 347 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 GAGE2AQ6NT46 116 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 RASL11AQ6T310 242 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 C8orf46Q8TAG6 207 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 MARVELD1Q9BSK0 173 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 FGF22Q9HCT0 170 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 C8orf88P0DMB2 117 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF345Q14585 488 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 MS4A4AQ96JQ5 239 aa5.18□□□□□ -1.58
SCN1A-212ENST00000636194 TCRBV16S1A1N1A0A5B0 115 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 GPR183P32249 361 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 HCP5Q6MZN7 132 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 DTX4Q9Y2E6 619 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 LRRK2Q5S007 2527 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 MED19A0JLT2 244 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF205O95201 554 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 SELLP14151 372 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 CTAG1AP78358 180 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 PMVKQ15126 192 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 C9orf50Q5SZB4 431 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 ZNF625Q96I27 306 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-212ENST00000636194 MEGF9Q9H1U4 602 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 STRCP1A6NGW2 1772 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 BCORQ6W2J9 1755 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 STRCQ7RTU9 1775 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 A0A0B4J2E0 115 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 A0A1B0GX12 115 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 FAM90A18PA6NE21 464 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 FAM90A16PA6NEW6 464 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 FAM90A9PA6NNJ1 464 aa5.17□□□□□ -1.58
SCN1A-212ENST00000636194 FAM90A5PA8MXJ8 464 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms