RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	KLF2	Q9Y5W3	355 aa	Predicted RBP	12	□□□□□ -0.49
NEDD4L-238	ENST00000635997	LOC102723971	A0A1B0GUV8	181 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997		A0A1W2PNU3	283 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MSGN1	A6NI15	193 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	HYPM	O75409	117 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGHV3-23	P01764	117 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	GALR1	P47211	349 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ZNF137P	P52743	207 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	FXYD3	Q14802	87 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997		E9PQ18	207 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	FCER1G	P30273	86 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MRPL54	Q6P161	138 aa	Known RBP	11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	NUP37	Q8NFH4	326 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	GTF3A	Q92664	365 aa	Known RBP	11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TM2D1	Q9BX74	207 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	UFC1	Q9Y3C8	167 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DUXB	A0A1W2PPF3	345 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SEC11B	P0C7V7	166 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	NEUROG1	Q92886	237 aa		11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CTXND1	A0A1B0GTU2	59 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	FCN1	O00602	326 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TOMM20L	Q6UXN7	152 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	C16orf82	Q7Z2V1	217 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DYNLRB2	Q8TF09	96 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	QTRT1	Q9BXR0	403 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SH3BGRL3	Q9H299	93 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DPM3	Q9P2X0	92 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	FCGR2B	P31994	310 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	KRTDAP	P60985	99 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IQCJ	Q1A5X6	159 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	RTN4RL2	Q86UN3	420 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TRAPPC1	Q9Y5R8	145 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MTOR	P42345	2549 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TRAV24	A0A0B4J272	114 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGHV1-46	P01743	117 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PTTG1IP	P53801	180 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TAF15	Q92804	592 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TMEM186	Q96B77	213 aa		11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-238	ENST00000635997	HELT	A6NFD8	242 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MOS	P00540	346 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	BMI1	P35226	326 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	OR5AU1	Q8NGC0	362 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DUX5	Q96PT3	197 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	VAX2	Q9UIW0	290 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	HKR1	P10072	659 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MMP9	P14780	707 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ZNF581	Q9P0T4	197 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SORL1	Q92673	2214 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1-27	A0A075B6S5	117 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	ZNF207	O43670	478 aa	Known RBP	11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	EGR1	P18146	543 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PAXX	Q9BUH6	204 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	WDR61	Q9GZS3	305 aa	Known RBP	11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CDC42EP3	Q9UKI2	254 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	TRAV34	A0A0B4J273	112 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	C5orf52	A6NGY3	159 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1D-33	P01593	117 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	IGKV1-33	P01594	117 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	DLK1	P80370	383 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	VAMP3	Q15836	100 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SIGLECL1	Q8N7X8	197 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997	CYB561D1	Q8N8Q1	229 aa		11.97	□□□□□ -0.49
NEDD4L-238	ENST00000635997		A0A0A6YYD4	124 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997		H3BQ15	152 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PSPN	O60542	156 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	OR10G8	Q8NGN5	311 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	SPOCK3	Q9BQ16	436 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	MRPL20	Q9BYC9	149 aa	Known RBP	11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	C2orf16	Q68DN1	1984 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	PLA2G2A	P14555	144 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	RAB24	Q969Q5	203 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	RNF24	Q9Y225	148 aa		11.96	□□□□□ -0.49
NEDD4L-238	ENST00000635997	COL4A4	P53420	1690 aa	Predicted RBP	11.96	□□□□□ -0.5
NEDD4L-238	ENST00000635997	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.96	□□□□□ -0.5
NEDD4L-238	ENST00000635997	UBE2C	O00762	179 aa		11.96	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HIST1H3A	P68431	136 aa		11.96	□□□□□ -0.5
NEDD4L-238	ENST00000635997	IL22RA2	Q969J5	263 aa		11.96	□□□□□ -0.5
NEDD4L-238	ENST00000635997	TRAV14DV4	A0A0A6YYC5	116 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	NDUFB4	O95168	129 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	DNM1P46	Q6ZS02	220 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HIGD1A	Q9Y241	93 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	LTBP2	Q14767	1821 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	PRRC2C	Q9Y520	2896 aa	Known RBP	11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	DYSF	O75923	2080 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HGFAC	Q04756	655 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	C5orf17	Q8NAS9	161 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	LINC00527	Q9UJ94	153 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	COLCA2	A8K830	154 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	PITX3	O75364	302 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HOXA4	Q00056	320 aa	Predicted RBP	11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	ZNF672	Q499Z4	452 aa	Predicted RBP	11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	HIST2H2BC	Q6DN03	193 aa		11.95	□□□□□ -0.5
NEDD4L-238	ENST00000635997	ZNF343	Q6P1L6	599 aa		11.95	□□□□□ -0.5

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