RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 HSPB1P04792 205 aaKnown RBP15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 CRYBA1P05813 215 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 S100A9P06702 114 aaKnown RBP15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 SNRNP70P08621 437 aaKnown RBP15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 DLK1P80370 383 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 KHDC3LQ587J8 217 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 GCSAMLQ5JQS6 135 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 C15orf54Q8N8G6 183 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 MGST2Q99735 147 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 GGACTQ9BVM4 153 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 TMPRSS5Q9H3S3 457 aa15.9■□□□□ 0.14
CHRNA4-209ENST00000627000 M0R036 132 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 NDUFS7O75251 213 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 HLA-DRB5Q30154 266 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 C8orf46Q8TAG6 207 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 TIMD4Q96H15 378 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 MBP02144 154 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 BCL2P10415 239 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 PCGF1Q9BSM1 259 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 UBTD1Q9HAC8 227 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 RPS10P5Q9NQ39 176 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 ONECUT1Q9UBC0 465 aa15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 PUS1Q9Y606 427 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHRNA4-209ENST00000627000 CTXND1A0A1B0GTU2 59 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 TMEM8BA6NDV4 472 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 ENSAO43768 121 aaKnown RBP15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 SMIM6P0DI80 62 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 IL3RAP26951 378 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 RPL8P62917 257 aaKnown RBP15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 OR5B3Q8NH48 314 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 CLEC7AQ9BXN2 247 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 TPSG1Q9NRR2 321 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 FKBP11Q9NYL4 201 aa15.88■□□□□ 0.13
CHRNA4-209ENST00000627000 C7orf77A4D0Y5 90 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 C1orf196B1AJZ1 125 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 PRRX1P54821 245 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 C10orf55Q5SWW7 151 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 LY6G5BQ8NDX9 201 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 RAB24Q969Q5 203 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 FAM122AQ96E09 287 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 TCEAL7Q9BRU2 100 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 COMMD5Q9GZQ3 224 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 A0A1W2PPH5 198 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 TMEM167AQ8TBQ9 72 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 TNFRSF14Q92956 283 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 GGTLC1Q9BX51 225 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 ACTR3CQ9C0K3 210 aaPredicted RBP15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 CHODLQ9H9P2 273 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 NPVFQ9HCQ7 196 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 NDUFA4L2Q9NRX3 87 aa15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 ZMAT5Q9UDW3 170 aaKnown RBP15.87■□□□□ 0.13
CHRNA4-209ENST00000627000 BUB1B-PAK6H3BSN5 160 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 SLC25A17O43808 307 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 YIF1AO95070 293 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 USF1P22415 310 aaPredicted RBP15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 MIC13Q5XKP0 118 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 MOB3BQ86TA1 216 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 LSM4Q9Y4Z0 139 aaKnown RBP15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 CGB1A6NKQ9 187 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 MPDU1O75352 247 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 LIPFP07098 398 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 AGAP20933 346 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 MC5RP33032 325 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 ACOT6Q3I5F7 207 aaPredicted RBP15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 RNF212Q495C1 297 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 PNKDQ8N490 385 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 OR4P4Q8NGL7 312 aa15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 ZNF430Q9H8G1 570 aaPredicted RBP15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 PATZ1Q9HBE1 687 aaKnown RBP15.86■□□□□ 0.13
CHRNA4-209ENST00000627000 TACC2O95359 2948 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 RNASE2P10153 161 aaKnown RBP15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 ARF6P62330 175 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 OR1L8Q8NGR8 309 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 GATAD1Q8WUU5 269 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 SSMEM1Q8WWF3 244 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 PXMP4Q9Y6I8 212 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 PLXNB1O43157 2135 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 H3BQ15 152 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 RBP4P02753 201 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 S100A6P06703 90 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 CNTFRP26992 372 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 OPRK1P41145 380 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 CDC34P49427 236 aaPredicted RBP15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 MLANAQ16655 118 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 MRGPRG-AS1Q2M3A8 158 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 BSXQ3C1V8 233 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 LURAP1LQ8IV03 231 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 BEND2Q8NDZ0 799 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 VSTM2AQ8TAG5 236 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 SIRT7Q9NRC8 400 aa15.85■□□□□ 0.13
CHRNA4-209ENST00000627000 IGHV1-3A0A0C4DH29 117 aa15.84■□□□□ 0.13
CHRNA4-209ENST00000627000 CYB5BO43169 146 aa15.84■□□□□ 0.13
CHRNA4-209ENST00000627000 OR4A5Q8NH83 315 aa15.84■□□□□ 0.13
CHRNA4-209ENST00000627000 INSIG2Q9Y5U4 225 aa15.84■□□□□ 0.13
CHRNA4-209ENST00000627000 C2orf83Q53S99 150 aa15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 LDLRAD2Q5SZI1 272 aa15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 FAM90A2PQ658T7 463 aa15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 C2CD4CQ8TF44 421 aa15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 SSBP3Q9BWW4 388 aaPredicted RBP15.83■□□□□ 0.13
CHRNA4-209ENST00000627000 UNKLQ9H9P5 680 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms