RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 APOBEC3DQ96AK3 386 aaPredicted RBP9.58□□□□□ -0.88
LINC00538-201ENST00000626109 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 CACFD1Q9UGQ2 172 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
LINC00538-201ENST00000626109 TRBV9A0A0B4J1U6 114 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 DEFB108AA8MXU0 73 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 FGF12P61328 243 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 DAZAP2Q15038 168 aaPredicted RBP9.57□□□□□ -0.88
LINC00538-201ENST00000626109 OR8G1Q15617 311 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 CEACAM21Q3KPI0 293 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 SP5Q6BEB4 398 aaPredicted RBP9.57□□□□□ -0.88
LINC00538-201ENST00000626109 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 LINC00596Q86U02 117 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 CMTM1Q8IZ96 169 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 OR2Z1Q8NG97 314 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 IL17DQ8TAD2 202 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 RXFP4Q8TDU9 374 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF488Q96MN9 340 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 ABHD14AQ9BUJ0 271 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 TUBA4BQ9H853 241 aa9.57□□□□□ -0.88
LINC00538-201ENST00000626109 TRAPPC2LH3BP13 241 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 AP4M1O00189 453 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 CRYBA1P05813 215 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 GYPEP15421 78 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 NFYBP25208 207 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 DMBX1Q8NFW5 382 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 PLPPR1Q8TBJ4 325 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 SECTM1Q8WVN6 248 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 PLEKHF2Q9H8W4 249 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 RPS10P5Q9NQ39 176 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 PLA2G2EQ9NZK7 142 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF581Q9P0T4 197 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 A0A1B0GW64 132 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 C1orf196B1AJZ1 125 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 FAM157AC9JC47 383 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 PDE6DO43924 150 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 ARG1P05089 322 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 RPS23P62266 143 aaKnown RBP9.56□□□□□ -0.88
LINC00538-201ENST00000626109 PRDX4Q13162 271 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 C1orf174Q8IYL3 243 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 OR5A2Q8NGI9 324 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 OR1J1Q8NGS3 322 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 TP53RKQ96S44 253 aa9.56□□□□□ -0.88
LINC00538-201ENST00000626109 RBM7Q9Y580 266 aaKnown RBP9.56□□□□□ -0.88
LINC00538-201ENST00000626109 SPTBN1Q01082 2364 aaKnown RBP9.55□□□□□ -0.88
LINC00538-201ENST00000626109 USP9XQ93008 2570 aaPredicted RBP9.55□□□□□ -0.88
LINC00538-201ENST00000626109 COLCA2A8K830 154 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 PITX3O75364 302 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 CA1P00915 261 aaPredicted RBP9.55□□□□□ -0.88
LINC00538-201ENST00000626109 NGFP01138 241 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 PPP1CBP62140 327 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 BAXQ07812 192 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 TAL2Q16559 108 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 NUP37Q8NFH4 326 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 OR8G5Q8NG78 346 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 IL22RA2Q969J5 263 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 SLC35B3Q9H1N7 401 aa9.55□□□□□ -0.88
LINC00538-201ENST00000626109 SHISA9B4DS77 424 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 J3QR06 171 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 CHEK1O14757 476 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 NAPSAO96009 420 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 BCL3P20749 454 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 VDAC1P21796 283 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 LOXP28300 417 aaPredicted RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 GLRXP35754 106 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 PAX9P55771 341 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 GNG3P63215 75 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 RHEBQ15382 184 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 GNPNAT1Q96EK6 184 aaPredicted RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 UHRF2Q96PU4 802 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 TMEM204Q9BSN7 226 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF732B4DXR9 585 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 C9JQL5 133 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 SIRPB1O00241 398 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 IGF1P05019 195 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 GPM6AP51674 278 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 OR2G3Q8NGZ4 309 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 OR1P1Q8NH06 330 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 SLC25A40Q8TBP6 338 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 LYRM2Q9NU23 88 aaPredicted RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 WDR83OSQ9Y284 106 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 FLNCQ14315 2725 aa9.54□□□□□ -0.88
LINC00538-201ENST00000626109 ANKHD1Q8IWZ3 2542 aaKnown RBP9.54□□□□□ -0.88
LINC00538-201ENST00000626109 PLAUP00749 431 aa9.53□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF718Q3SXZ3 478 aa9.53□□□□□ -0.88
LINC00538-201ENST00000626109 FAM213BQ8TBF2 198 aa9.53□□□□□ -0.88
LINC00538-201ENST00000626109 ACTR3CQ9C0K3 210 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms