RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
LINC00552-201ENST00000625151 NCOR1P1Q9H4R4 102 aa12.51□□□□□ -0.41
LINC00552-201ENST00000625151 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SAA2-SAA4A0A096LPE2 208 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SAA2P0DJI9 122 aaPredicted RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 NPY1RP25929 384 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 KIR2DS2P43631 304 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 YPEL3P61236 119 aaPredicted RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 C17orf58Q2M2W7 97 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 BHLHA15Q7RTS1 189 aaPredicted RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 STARD4Q96DR4 205 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 YLPM1P49750 1951 aaKnown RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SLC17A3O00476 420 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SCGB1D1O95968 90 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CA2P00918 260 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CGB3P0DN86 165 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CGB7P0DN87 165 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 USF2Q15853 346 aaPredicted RBP12.5□□□□□ -0.41
LINC00552-201ENST00000625151 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 SLC25A15Q9Y619 301 aa12.5□□□□□ -0.41
LINC00552-201ENST00000625151 CGAP01215 116 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 IGFBP2P18065 325 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 CFHR2P36980 270 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 RHOBP62745 196 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 DUX4L9Q6RFH8 374 aaPredicted RBP12.49□□□□□ -0.41
LINC00552-201ENST00000625151 SARAFQ96BY9 339 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 TMEM14BQ9NUH8 114 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 PROCRQ9UNN8 238 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 CBLN1P23435 193 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 ZNF83P51522 516 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
LINC00552-201ENST00000625151 FOXA2Q9Y261 457 aaPredicted RBP12.49□□□□□ -0.41
LINC00552-201ENST00000625151 SMG1Q96Q15 3661 aaKnown RBP12.49□□□□□ -0.41
LINC00552-201ENST00000625151 EREGO14944 169 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
LINC00552-201ENST00000625151 ZNF90Q03938 601 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 FAM122AQ96E09 287 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 CHODLQ9H9P2 273 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 POLR3KQ9Y2Y1 108 aaPredicted RBP12.48□□□□□ -0.41
LINC00552-201ENST00000625151 SPRY3O43610 288 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 RPL29P47914 159 aaKnown RBP12.48□□□□□ -0.41
LINC00552-201ENST00000625151 RAB7AP51149 207 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 C11orf52Q96A22 123 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 HINT2Q9BX68 163 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
LINC00552-201ENST00000625151 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 ACTL6BO94805 426 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 LHBP01229 141 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 LINC00310P59036 64 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 PRR20EP86478 221 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 PRR20CP86479 221 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 PRR20DP86480 221 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 PRR20BP86481 221 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 PRR20AP86496 221 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 VHLLQ6RSH7 139 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 MS4A10Q96PG2 267 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 IGFL2Q6UWQ7 119 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 NAGKQ9UJ70 344 aa12.47□□□□□ -0.41
LINC00552-201ENST00000625151 TRAV17A0A0B4J275 112 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 M0R1B8 84 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 LINC00869P0C866 280 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 CD33P20138 364 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 NEUROG1Q92886 237 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 EAF1Q96JC9 268 aaPredicted RBP12.46□□□□□ -0.41
LINC00552-201ENST00000625151 ATMQ13315 3056 aa12.46□□□□□ -0.41
LINC00552-201ENST00000625151 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 KBTBD11-OT1A0A1B0GTJ5 212 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 ITGB1BP1O14713 200 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 SELENOTP62341 195 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 OR5I1Q13606 314 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 MRPL18Q9H0U6 180 aaKnown RBP12.46□□□□□ -0.42
LINC00552-201ENST00000625151 PLCE1Q9P212 2302 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 OR51B2Q9Y5P1 312 aa12.46□□□□□ -0.42
LINC00552-201ENST00000625151 C9JCJ5 164 aa12.45□□□□□ -0.42
LINC00552-201ENST00000625151 MT-CO2P00403 227 aa12.45□□□□□ -0.42
LINC00552-201ENST00000625151 GNG10P50151 68 aa12.45□□□□□ -0.42
LINC00552-201ENST00000625151 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
LINC00552-201ENST00000625151 RAB31Q13636 194 aa12.45□□□□□ -0.42
LINC00552-201ENST00000625151 KRTCAP3Q53RY4 240 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms