RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SSTR5P35346 364 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 ADAT3Q96EY9 351 aaPredicted RBP5.35□□□□□ -1.55
CDKL5-205ENST00000623535 SPAG8Q99932 426 aaPredicted RBP5.35□□□□□ -1.55
CDKL5-205ENST00000623535 MRM2Q9UI43 246 aaKnown RBP5.35□□□□□ -1.55
CDKL5-205ENST00000623535 P2RY1P47900 373 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 VWC2Q2TAL6 325 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 SH2D6Q7Z4S9 175 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 SAXO1Q8IYX7 474 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 OR5AU1Q8NGC0 362 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 ZNF831Q5JPB2 1677 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 MSMBP08118 114 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 Q6AWC8 147 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 DRAXINQ8NBI3 349 aaPredicted RBP5.35□□□□□ -1.55
CDKL5-205ENST00000623535 OR10AG1Q8NH19 301 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 KIF13BQ9NQT8 1826 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 CTXND1A0A1B0GTU2 59 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 VWC2LB2RUY7 222 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 HSPE1P61604 102 aaKnown RBP5.35□□□□□ -1.55
CDKL5-205ENST00000623535 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 RCHY1Q96PM5 261 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 PPP6CO00743 305 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 COX6A1P12074 109 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 UCN2Q96RP3 112 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 CACNA1HO95180 2353 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 ANKRD31Q8N7Z5 1873 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 AMY1AP04745 511 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 PLA2G5P39877 138 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 SLC25A34Q6PIV7 304 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 ZNF257Q9Y2Q1 563 aa5.35□□□□□ -1.55
CDKL5-205ENST00000623535 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 TRBV5-4A0A0C4DH59 114 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 ERCC8Q13216 396 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 SMDT1Q9H4I9 107 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 A0A1B0GW15 77 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 PAQR9Q6ZVX9 377 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 PPP1R1CQ8WVI7 109 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 KLK15Q9H2R5 256 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 SP6Q3SY56 376 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 OR4D5Q8NGN0 318 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 FGF8P55075 233 aaPredicted RBP5.34□□□□□ -1.55
CDKL5-205ENST00000623535 RBM11P57052 281 aaKnown RBP5.34□□□□□ -1.55
CDKL5-205ENST00000623535 PPP1R1AQ13522 171 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 C6orf226Q5I0X4 101 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 VAX2Q9UIW0 290 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 PATJQ8NI35 1801 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 WDR38Q5JTN6 314 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 SPSB4Q96A44 273 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 TIMP3P35625 211 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 TCL1AP56279 114 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 ZNF446Q9NWS9 450 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 FABP2P12104 132 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 CDCP2Q5VXM1 449 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 TMEM144Q7Z5S9 345 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 RFLNBQ8N5W9 214 aa5.34□□□□□ -1.55
CDKL5-205ENST00000623535 DEFB130BP0DP73 79 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 DEFB130AP0DP74 79 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 CA7P43166 264 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 FOXB2Q5VYV0 432 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 SIGLEC15Q6ZMC9 328 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 TEX45Q8NA69 505 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 SMIM14Q96QK8 99 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 TSSC4Q9Y5U2 329 aaPredicted RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 CHD3Q12873 2000 aaKnown RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 ZFC3H1O60293 1989 aaKnown RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 TMEM187Q14656 261 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 APOHP02749 345 aaPredicted RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 KLF17Q5JT82 389 aaPredicted RBP5.34□□□□□ -1.56
CDKL5-205ENST00000623535 ATP1A1-AS1Q5TC04 95 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 OR4D11Q8NGI4 311 aa5.34□□□□□ -1.56
CDKL5-205ENST00000623535 LINC01619G3V211 115 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 NDUFS5O43920 106 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 DRAM1Q8N682 238 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 GGTLC1Q9BX51 225 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 PAM16Q9Y3D7 125 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 TNCP24821 2201 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 H3BUX3 64 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FSHBP01225 129 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 CD28P10747 220 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FAM208BQ5VWN6 2430 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 MPTX1A8MV57 137 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 CTDSPLO15194 276 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FREM3P0C091 2139 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 DUTP33316 252 aaKnown RBP5.33□□□□□ -1.56
CDKL5-205ENST00000623535 SMIM2Q9BVW6 85 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 BCL2L11O43521 198 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 SFT2D2O95562 160 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 DCTDP32321 178 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 HOXD13P35453 343 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 MOSPD3O75425 235 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 PSG2P11465 335 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 SNAI3Q3KNW1 292 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 ARL6IP6Q8N6S5 226 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 ZNF488Q96MN9 340 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms