RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 TRAPPC2BP0DI82 140 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 RND3P61587 244 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 CLVS1Q8IUQ0 354 aaPredicted RBP11.25□□□□□ -0.61
LINC00643-205ENST00000623219 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 Q8N1Y9 231 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 OR5B3Q8NH48 314 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
LINC00643-205ENST00000623219 ABHD1Q96SE0 405 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 NDUFA4L2Q9NRX3 87 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
LINC00643-205ENST00000623219 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
LINC00643-205ENST00000623219 TEX50A0A1B0GTY4 177 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 A8MWP6 167 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 A8MZ25 164 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 HLA-AP01891 365 aaKnown RBP11.24□□□□□ -0.61
LINC00643-205ENST00000623219 CD3DP04234 171 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 SERPINE2P07093 398 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 IGHV4-30-4P0DP06 118 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 MECP2P51608 486 aaKnown RBP11.24□□□□□ -0.61
LINC00643-205ENST00000623219 TMBIM6P55061 237 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 MRPS10P82664 201 aaKnown RBP11.24□□□□□ -0.61
LINC00643-205ENST00000623219 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
LINC00643-205ENST00000623219 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 THAP7Q9BT49 309 aaPredicted RBP11.24□□□□□ -0.61
LINC00643-205ENST00000623219 TMEM14BQ9NUH8 114 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 S4R3C0 116 aa11.24□□□□□ -0.61
LINC00643-205ENST00000623219 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
LINC00643-205ENST00000623219 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 GABARAPH6UMI1 98 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 CD74P04233 296 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 OR13C7P0DN81 318 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 PGAM2P15259 253 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 TAS2R19P59542 299 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 TMEM229BQ8NBD8 167 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 DYNC2LI1Q8TCX1 351 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 TMEM56Q96MV1 263 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 NSG2Q9Y328 171 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
LINC00643-205ENST00000623219 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 DNAH7Q8WXX0 4024 aa11.23□□□□□ -0.61
LINC00643-205ENST00000623219 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 NOL3O60936 208 aaKnown RBP11.22□□□□□ -0.61
LINC00643-205ENST00000623219 OR2C1O95371 312 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 GPR183P32249 361 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 PPP5CP53041 499 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 FAM106AQ4KMX7 169 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 H2BFWTQ7Z2G1 175 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 HINT2Q9BX68 163 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 ZC4H2Q9NQZ6 224 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 C19orf73Q9NVV2 129 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
LINC00643-205ENST00000623219 RABL2AQ9UBK7 228 aaPredicted RBP11.22□□□□□ -0.61
LINC00643-205ENST00000623219 RABL2BQ9UNT1 228 aa11.22□□□□□ -0.61
LINC00643-205ENST00000623219 DBX1A6NMT0 343 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 CTDSP2O14595 271 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 RAB3DO95716 219 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 FOLR2P14207 255 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 PIGPP57054 158 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.61
LINC00643-205ENST00000623219 STEAP1BQ6NZ63 245 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 OR1L6Q8NGR2 347 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 SMIM4Q8WVI0 70 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 MRGPRFQ96AM1 343 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
LINC00643-205ENST00000623219 TMEM213A2RRL7 107 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 CTDSPLO15194 276 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 TGOLN2O43493 480 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 CLEC3BP05452 202 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 PI3P19957 117 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 EDN2P20800 178 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
LINC00643-205ENST00000623219 MEF2DQ14814 521 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 DEFB114Q30KQ6 69 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 SLC25A24Q6NUK1 477 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 CCDC71LQ8N9Z2 235 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 OR4A16Q8NH70 328 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 TERB2Q8NHR7 220 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 PALMDQ9NP74 551 aa11.2□□□□□ -0.62
LINC00643-205ENST00000623219 H3BMQ9 156 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms