RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 DMBX1Q8NFW5 382 aa17.63■□□□□ 0.41
CPSF1-214ENST00000622776 DAZ1Q9NQZ3 744 aaKnown RBP17.63■□□□□ 0.41
CPSF1-214ENST00000622776 SSR3Q9UNL2 185 aa17.63■□□□□ 0.41
CPSF1-214ENST00000622776 KIR2DL5BA0A0G2JN68 375 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 KIR2DL5BA0A0G2JPC4 375 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 OR2T8A6NH00 312 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 OR13C7P0DN81 318 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 ATF4P18848 351 aaPredicted RBP17.62■□□□□ 0.41
CPSF1-214ENST00000622776 ODF3L2Q3SX64 289 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 LAMTOR1Q6IAA8 161 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 ZNF818PQ6ZRF7 136 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 KIR2DL5AQ8N109 375 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 STPG3Q8N7X2 389 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 OR5H6Q8NGV6 325 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 OR51H1Q8NH63 302 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 KIR2DL5BQ8NHK3 375 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 CD300LFQ8TDQ1 290 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 RNF183Q96D59 192 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 SLC25A38Q96DW6 304 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 PLEKHA2Q9HB19 425 aa17.62■□□□□ 0.41
CPSF1-214ENST00000622776 S1PR2O95136 353 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 FCER2P06734 321 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 TRAPPC2P0DI81 140 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 TRAPPC2BP0DI82 140 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 SDC2P34741 201 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 THOC7Q6I9Y2 204 aaKnown RBP17.61■□□□□ 0.41
CPSF1-214ENST00000622776 SLC25A24Q6NUK1 477 aa17.61■□□□□ 0.41
CPSF1-214ENST00000622776 BSCL2Q96G97 398 aaPredicted RBP17.61■□□□□ 0.41
CPSF1-214ENST00000622776 KLK5Q9Y337 293 aaPredicted RBP17.61■□□□□ 0.41
CPSF1-214ENST00000622776 SERPINE2P07093 398 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 SCAND1P57086 179 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 WT1-ASQ06250 92 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 AADACL3Q5VUY0 350 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 SPSB3Q6PJ21 355 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 HSD17B13Q7Z5P4 300 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-214ENST00000622776 SPARTQ8N0X7 666 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 GIMAP1Q8WWP7 306 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 COMMD9Q9P000 198 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 ETV7Q9Y603 341 aa17.6■□□□□ 0.41
CPSF1-214ENST00000622776 TEX50A0A1B0GTY4 177 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 NDUFA4O00483 81 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 CLEC2LP0C7M8 214 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 RPL35AP18077 110 aaKnown RBP17.59■□□□□ 0.41
CPSF1-214ENST00000622776 MXD1Q05195 221 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 TMEM17Q86X19 198 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 OR1L8Q8NGR8 309 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 CHRDL1Q9BU40 450 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 C20orf24Q9BUV8 137 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 AUNIPQ9H7T9 357 aa17.59■□□□□ 0.41
CPSF1-214ENST00000622776 A0A0A6YYH2 397 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 IGHV3-21A0A0B4J1V1 117 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 OR4C46A6NHA9 309 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 A6NJ64 397 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 MFAP2P55001 183 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 TMEM217Q8N7C4 229 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 OR5AP2Q8NGF4 316 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 FCGR1BQ92637 280 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 ATP6V0BQ99437 205 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 C21orf62Q9NYP8 219 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 RAB26Q9ULW5 256 aa17.58■□□□□ 0.4
CPSF1-214ENST00000622776 F11RQ9Y624 299 aaKnown RBP17.58■□□□□ 0.4
CPSF1-214ENST00000622776 IGHV3OR16-8A0A075B7F1 116 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 K7EMT4 169 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 GNRHRP30968 328 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 ERVK-16P61578 105 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 IDNKQ5T6J7 187 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 SCARB1Q8WTV0 552 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 GALNT14Q96FL9 552 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 HINT2Q9BX68 163 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 MAP6D1Q9H9H5 199 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 NDUFA4L2Q9NRX3 87 aa17.57■□□□□ 0.4
CPSF1-214ENST00000622776 MARCH11A6NNE9 402 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 F8W735 103 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-214ENST00000622776 ZNF207O43670 478 aaKnown RBP17.56■□□□□ 0.4
CPSF1-214ENST00000622776 CTSDP07339 412 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-214ENST00000622776 ADMP35318 185 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 HERV-K104P61576 105 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 RPP25LQ8N5L8 163 aaKnown RBP17.56■□□□□ 0.4
CPSF1-214ENST00000622776 BORCS5Q969J3 196 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 LSM10Q969L4 123 aaKnown RBP17.56■□□□□ 0.4
CPSF1-214ENST00000622776 RNF167Q9H6Y7 350 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 DIABLOQ9NR28 239 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 DNAH10Q8IVF4 4471 aa17.56■□□□□ 0.4
CPSF1-214ENST00000622776 CBX5P45973 191 aa17.55■□□□□ 0.4
CPSF1-214ENST00000622776 OR5B3Q8NH48 314 aa17.55■□□□□ 0.4
CPSF1-214ENST00000622776 PHLDA1Q8WV24 401 aaPredicted RBP17.55■□□□□ 0.4
CPSF1-214ENST00000622776 MEIS3P1A6NDR6 274 aa17.54■□□□□ 0.4
CPSF1-214ENST00000622776 K7EIM0 57 aa17.54■□□□□ 0.4
CPSF1-214ENST00000622776 F2RP25116 425 aa17.54■□□□□ 0.4
CPSF1-214ENST00000622776 FCGR2BP31994 310 aaPredicted RBP17.54■□□□□ 0.4
CPSF1-214ENST00000622776 UBAC2Q8NBM4 344 aa17.54■□□□□ 0.4
CPSF1-214ENST00000622776 NSG2Q9Y328 171 aa17.54■□□□□ 0.4
CPSF1-214ENST00000622776 C15orf62A8K5M9 175 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 PGLYRP1O75594 196 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-214ENST00000622776 RLN1P04808 185 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 LPAR6P43657 344 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 Q56UQ5 140 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 KRTAP17-1Q9BYP8 105 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 C6orf62Q9GZU0 229 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-214ENST00000622776 EHFQ9NZC4 300 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms