RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 Q8N9W7 124 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 SSMEM1Q8WWF3 244 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 COMMD5Q9GZQ3 224 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 ZFP57Q9NU63 452 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 HSPB7Q9UBY9 170 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 FCN1O00602 326 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 HOXA3O43365 443 aaPredicted RBP14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 AP2S1P53680 142 aaPredicted RBP14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 TNXAQ16473 311 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 RASL11BQ9BPW5 248 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 MED9Q9NWA0 146 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 CACFD1Q9UGQ2 172 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 RCL1Q9Y2P8 373 aaKnown RBP14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 ZNF257Q9Y2Q1 563 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 TEX50A0A1B0GTY4 177 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 SSSCA1O60232 199 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 CA2P00918 260 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 RLN2P04090 185 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 FGF2P09038 288 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 PET100P0DJ07 73 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 MAS1LP35410 378 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 SPCS3P61009 180 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 HSPE1P61604 102 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 INO80EQ8NBZ0 244 aaPredicted RBP14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 OR52E5Q8NH55 327 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 ST8SIA2Q92186 375 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 RBKSQ9H477 322 aa14.17□□□□□ -0.14
PTCHD3-202ENST00000622555 KANTRA0A1W2PQU2 76 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 CEBPZOSA8MTT3 80 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 INAFM1C9JVW0 142 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 SYNGR2O43760 224 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 MED6O75586 246 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 NMBP08949 121 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 TUSC1Q2TAM9 212 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 C10orf55Q5SWW7 151 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 C5orf56Q8N8D9 126 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 OR1L8Q8NGR8 309 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 OR5B3Q8NH48 314 aa14.16□□□□□ -0.14
PTCHD3-202ENST00000622555 FGF16O43320 207 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 DEDDO75618 318 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 CNIH1O95406 144 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 ALKAL2Q6UX46 152 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 C16orf82Q7Z2V1 217 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 AQP10Q96PS8 301 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 OR5AC2Q9NZP5 309 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 VPREB3Q9UKI3 123 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 CHST1O43916 411 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 IAPPP10997 89 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 HOXA1P49639 335 aaPredicted RBP14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 COMPP49747 757 aaPredicted RBP14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 DTD1Q8TEA8 209 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 DCUN1D4Q92564 292 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 PHYHIPLQ96FC7 376 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 CITED4Q96RK1 184 aa14.15□□□□□ -0.14
PTCHD3-202ENST00000622555 M0QZK8 103 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 HLA-DRB1P01911 266 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 PVALBP20472 110 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 RPL27AP46776 148 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 VAMP2P63027 116 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 PRCDQ00LT1 54 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 PDLIM3Q53GG5 364 aaPredicted RBP14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 STOML3Q8TAV4 291 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 PCNPQ8WW12 178 aaKnown RBP14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 ARPC5LQ9BPX5 153 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 ENY2Q9NPA8 101 aa14.14□□□□□ -0.15
PTCHD3-202ENST00000622555 SH2D7A6NKC9 451 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 E7EUB6 86 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 CX3CL1P78423 397 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 SSBP2P81877 361 aaPredicted RBP14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 FXYD3Q14802 87 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 SRSF12Q8WXF0 261 aaKnown RBP14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 DUX5Q96PT3 197 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 RAB40CQ96S21 281 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 SLC25A32Q9H2D1 315 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 PLEKHA3Q9HB20 300 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 CYTL1Q9NRR1 136 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 NDUFA4L2Q9NRX3 87 aa14.13□□□□□ -0.15
PTCHD3-202ENST00000622555 E5RGE8 158 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 AMY1AP04745 511 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 ZNF562Q6V9R5 426 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 COMMD7Q86VX2 200 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 ZFHX3Q15911 3703 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 NSD1Q96L73 2696 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 IGHV7-81A0A0B4J1V7 117 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 A0A1B0GW64 132 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 MSGN1A6NI15 193 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 CGB1A6NKQ9 187 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 TMEM86BQ8N661 226 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 OR10W1Q8NGF6 305 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 ABHD5Q8WTS1 349 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 ARPC1AQ92747 370 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 CIB3Q96Q77 187 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 HSPB9Q9BQS6 159 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 HIPK2Q9H2X6 1198 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 C11orf1Q9H5F2 150 aa14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 HEYLQ9NQ87 328 aaPredicted RBP14.12□□□□□ -0.15
PTCHD3-202ENST00000622555 KCNAB3O43448 404 aa14.11□□□□□ -0.15
PTCHD3-202ENST00000622555 TMEM50AO95807 157 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms