RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SNRNP70P08621 437 aaKnown RBP8.51□□□□□ -1.05
VPS11-208ENST00000621676 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 EFNB3Q15768 340 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 FBXL19-AS1Q494R0 122 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 ISOC2Q96AB3 205 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 HTR1DP28221 377 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 EFNA4P52798 201 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 SRSF2Q01130 221 aaKnown RBP8.51□□□□□ -1.05
VPS11-208ENST00000621676 FFAR4Q5NUL3 377 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 LRTM2Q8N967 370 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 MARC2Q969Z3 335 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 UNKLQ9H9P5 680 aaKnown RBP8.51□□□□□ -1.05
VPS11-208ENST00000621676 FAM212BQ9NTI7 297 aaPredicted RBP8.51□□□□□ -1.05
VPS11-208ENST00000621676 LPAR3Q9UBY5 353 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 A0A0U1RQK1 487 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 FAM157CP0CG43 387 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 SLC25A6P12236 298 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 ORM2P19652 201 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 CLEC2AQ6UVW9 174 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 NABP2Q9BQ15 211 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 LINC01548A6NM66 108 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 RNASEK-C17orf49H0YIS7 233 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 IGFBP2P18065 325 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 SPATA31B1PQ5VZV4 182 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 ZNF66Q6ZN08 573 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 CBLN2Q8IUK8 224 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 C11orf44Q8N8P7 122 aa8.5□□□□□ -1.05
VPS11-208ENST00000621676 IGHV1-3A0A0C4DH29 117 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 B3GALNT1O75752 331 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
VPS11-208ENST00000621676 HRASP01112 189 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
VPS11-208ENST00000621676 HBG1P69891 147 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 HBG2P69892 147 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 ZNF345Q14585 488 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 LFNGQ8NES3 379 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 RAB40CQ96S21 281 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 UQCC1Q9NVA1 299 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 MIOXQ9UGB7 285 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 TEX50A0A1B0GTY4 177 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 BUB1B-PAK6H3BSN5 160 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 OR5G3P0C626 314 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 IGHV4-38-2P0DP08 117 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 NPY1RP25929 384 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 RAB11AP62491 216 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 ZNF266Q14584 549 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 HLA-DRB5Q30154 266 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 NPIPB3Q92617 1050 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 RPUSD4Q96CM3 377 aaKnown RBP8.49□□□□□ -1.05
VPS11-208ENST00000621676 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 A0A1W2PPH5 198 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 C15orf62A8K5M9 175 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 PITX3O75364 302 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 KBTBD11O94819 623 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 SAA4P35542 130 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 THBS3P49746 956 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 PRRX1P54821 245 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 HABP2Q14520 560 aaPredicted RBP8.49□□□□□ -1.05
VPS11-208ENST00000621676 C11orf71Q6IPW1 123 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 ACSM6Q6P461 480 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 OR4P4Q8NGL7 312 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 ATP5SQ99766 215 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 HIF1ANQ9NWT6 349 aa8.49□□□□□ -1.05
VPS11-208ENST00000621676 MRPL36Q9P0J6 103 aaKnown RBP8.49□□□□□ -1.05
VPS11-208ENST00000621676 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 ZNF90Q03938 601 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 SLC24A4Q8NFF2 622 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 TMEM170AQ8WVE7 144 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 CACFD1Q9UGQ2 172 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 PGPEP1LA6NFU8 196 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 RBP4P02753 201 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 MDKP21741 143 aaPredicted RBP8.48□□□□□ -1.05
VPS11-208ENST00000621676 CD1BP29016 333 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 WT1-ASQ06250 92 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 TRAT1Q6PIZ9 186 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 OR51G1Q8NGK1 321 aa8.48□□□□□ -1.05
VPS11-208ENST00000621676 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 hCG_1809904A0A1W2PP81 198 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 A0A1W2PPE2 198 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 A0A1W2PR64 198 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 A0A1W2PRV1 198 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 ZNF207O43670 478 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 C3orf36Q3SXR2 165 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 G3V318 75 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 FOXH1O75593 365 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 AVPP01185 164 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 ZNF329Q86UD4 541 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 PIP4P2Q8N4L2 257 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 NECAP1Q8NC96 275 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 HSPB7Q9UBY9 170 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 WASHC3Q9Y3C0 194 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 A0A1W2PPV4 95 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms