RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SLC25A42Q86VD7 318 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 TMEM17Q86X19 198 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 OR51H1Q8NH63 302 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 FCGR1BQ92637 280 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 ZNF414Q96IQ9 312 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 SLC5A7Q9GZV3 580 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 KLK9Q9UKQ9 250 aa8.56□□□□□ -1.04
CPNE3-210ENST00000621245 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 ZNF320A2RRD8 509 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 A8MWP6 167 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 UPK2O00526 184 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 SLC22A5O76082 557 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 MAS1LP35410 378 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 EWSR1Q01844 656 aaKnown RBP eCLIP8.55□□□□□ -1.04
CPNE3-210ENST00000621245 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 LAX1Q8IWV1 398 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 UXS1Q8NBZ7 420 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 VSTM2AQ8TAG5 236 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 EEF1AKMT3Q96AZ1 226 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 FXYD6Q9H0Q3 95 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 HRASLSQ9HDD0 168 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 SLC2A8Q9NY64 477 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 ETV7Q9Y603 341 aa8.55□□□□□ -1.04
CPNE3-210ENST00000621245 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
CPNE3-210ENST00000621245 SCGNO76038 276 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 HRASP01112 189 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 IFNA6P05013 189 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 GNRHRP30968 328 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 WT1-ASQ06250 92 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 ZNF502Q8TBZ5 544 aa8.54□□□□□ -1.04
CPNE3-210ENST00000621245 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 IGHV3OR16-8A0A075B7F1 116 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 DBX1A6NMT0 343 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 RBFOX2O43251 390 aaKnown RBP eCLIP8.53□□□□□ -1.04
CPNE3-210ENST00000621245 RLN1P04808 185 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 CLEC3BP05452 202 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 RFX2P48378 723 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 TAS2R31P59538 309 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 MSMO1Q15800 293 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 FAM209BQ5JX69 171 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 ZNF57Q68EA5 555 aaPredicted RBP8.53□□□□□ -1.04
CPNE3-210ENST00000621245 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
CPNE3-210ENST00000621245 ANAPC10Q9UM13 185 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 NSG2Q9Y328 171 aa8.53□□□□□ -1.04
CPNE3-210ENST00000621245 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 PMP2P02689 132 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 DEFA4P12838 97 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 LSM3P62310 102 aaKnown RBP8.52□□□□□ -1.05
CPNE3-210ENST00000621245 ZNF585BQ52M93 769 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 AADACL3Q5VUY0 350 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 OR5AP2Q8NGF4 316 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 OR52B4Q8NGK2 314 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 OR4A5Q8NH83 315 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 OVOL2Q9BRP0 275 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 CHRDL1Q9BU40 450 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 QTRT1Q9BXR0 403 aaKnown RBP8.52□□□□□ -1.05
CPNE3-210ENST00000621245 EHFQ9NZC4 300 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 UBQLN2Q9UHD9 624 aa8.52□□□□□ -1.05
CPNE3-210ENST00000621245 A0A0A6YYH2 397 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 TRBV7-1A0A0A6YYK4 115 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 OR2T8A6NH00 312 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 A6NJ64 397 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 ZNF207O43670 478 aaKnown RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 HPRT1P00492 218 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 C8orf88P0DMB2 117 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 OR13C7P0DN81 318 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 NQO2P16083 231 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 HIST1H1BP16401 226 aaKnown RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 RPS19P39019 145 aaKnown RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 TAS2R20P59543 309 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 GDPD1Q8N9F7 314 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 ZBTB34Q8NCN2 500 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 DMBX1Q8NFW5 382 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 SVIPQ8NHG7 77 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 GIMAP1Q8WWP7 306 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 FCAMRQ8WWV6 532 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 GGTLC1Q9BX51 225 aa8.51□□□□□ -1.05
CPNE3-210ENST00000621245 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 ZNF436Q9C0F3 470 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-210ENST00000621245 K7EIM0 57 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 TGOLN2O43493 480 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 XRCC3O43542 346 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 PGLYRP1O75594 196 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-210ENST00000621245 DHFRP00374 187 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
CPNE3-210ENST00000621245 G6PCP35575 357 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 HERV-K104P61576 105 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 CATR1Q13166 79 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 FAM106AQ4KMX7 169 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 CT83Q5H943 113 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 TOR2AQ5JU69 321 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms