RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMEM106BQ9NUM4 274 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 WASHC3Q9Y3C0 194 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 COL4A2P08572 1712 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OTOGLQ3ZCN5 2332 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 SCO2A0A1W2PP80 73 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 MARCH11A6NNE9 402 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 C17orf98A8MV24 154 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 PLAUP00749 431 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OR5AL1P0C617 328 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 PAX1P15863 534 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 TNFAIP6P98066 277 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-216ENST00000620854 FOXL2NBQ6ZUU3 175 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 TCTEX1D1Q8N7M0 179 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OR1L6Q8NGR2 347 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 PRSS3P2Q8NHM4 247 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OPN3Q9H1Y3 402 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-216ENST00000620854 SPG11Q96JI7 2443 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 TRBV20OR9-2A0A075B6H5 130 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 GGCTO75223 188 aaKnown RBP5.82□□□□□ -1.48
NEDD9-216ENST00000620854 OR2H2O95918 312 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 COA6Q5JTJ3 125 aaKnown RBP5.82□□□□□ -1.48
NEDD9-216ENST00000620854 DNLZQ5SXM8 178 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 GGNQ86UU5 652 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 OR4S2Q8NH73 311 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 FAM216AQ8WUB2 273 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 WDYHV1Q96HA8 205 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 SFRP2Q96HF1 295 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 C1QTNF5Q9BXJ0 243 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 LPAR2Q9HBW0 351 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 HELTA6NFD8 242 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 NCBP2LA6PVI3 153 aaKnown RBP5.82□□□□□ -1.48
NEDD9-216ENST00000620854 M0R2Z0 102 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 NDUFB3O43676 98 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 ARL14EPLP0DKL9 152 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 SFTPCP11686 197 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 NPY1RP25929 384 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 VMA21Q3ZAQ7 101 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 Q56UQ5 140 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 MIC13Q5XKP0 118 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 Q6ZSR3 168 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 FAM19A2Q8N3H0 131 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 OR1B1Q8NGR6 318 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 OR2T6Q8NHC8 308 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 RNF138Q8WVD3 245 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 FLYWCH2Q96CP2 140 aaKnown RBP5.82□□□□□ -1.48
NEDD9-216ENST00000620854 SGK494Q96LW2 274 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 KIAA1549Q9HCM3 1950 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 PINLYPA6NC86 204 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 NEURL1O76050 574 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 DKK1O94907 266 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 IGHV3-48P01763 117 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 MFAP2P55001 183 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 KLF3P57682 345 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-216ENST00000620854 LYZP61626 148 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 FXYD3Q14802 87 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 PXMP4Q9Y6I8 212 aa5.82□□□□□ -1.48
NEDD9-216ENST00000620854 HCFC1P51610 2035 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 TMSB15BA0A087X1C1 80 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 OOEPA6NGQ2 149 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 WNT9BO14905 357 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 CD1BP29016 333 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 PEAR1Q5VY43 1037 aaPredicted RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 GMPPAQ96IJ6 420 aaPredicted RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 DCTN5Q9BTE1 182 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 MRPL18Q9H0U6 180 aaKnown RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 DNAJC4Q9NNZ3 241 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 DYSFO75923 2080 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM210A6NLX4 147 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 FAM90A27PA6NNH2 459 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 CLDN14O95500 239 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 HBZP02008 142 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 TNFRSF1AP19438 455 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 BRS3P32247 399 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 SRP14P37108 136 aaKnown RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 PDLIM4P50479 330 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 KRTCAP3Q53RY4 240 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 FBXW9Q5XUX1 488 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM14EPQ6UXP3 125 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 OR8I2Q8N0Y5 310 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 ABHD12Q8N2K0 398 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 ST6GALNAC3Q8NDV1 305 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 LSM10Q969L4 123 aaKnown RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 CHRDL1Q9BU40 450 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 CXXC4Q9H2H0 198 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 ELOVL5Q9NYP7 299 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 RNF114Q9Y508 228 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 RPL15P61313 204 aaKnown RBP5.81□□□□□ -1.48
NEDD9-216ENST00000620854 TNXAQ16473 311 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 LRRC10Q5BKY1 277 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 LEAP2Q969E1 77 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 HARBI1Q96MB7 349 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 RNF2Q99496 336 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 CLEC5AQ9NY25 188 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 BET1LQ9NYM9 111 aa5.81□□□□□ -1.48
NEDD9-216ENST00000620854 NCKAP5O14513 1909 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 HINT1P49773 126 aaPredicted RBP5.8□□□□□ -1.48
NEDD9-216ENST00000620854 B3GALT5-AS1P59052 145 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 CCL8P80075 99 aa5.8□□□□□ -1.48
NEDD9-216ENST00000620854 PLA2G2CQ5R387 149 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms