RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 FAM223BA6NKX1 122 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 ZNF785A8K8V0 405 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 PPP5D1E7EU14 171 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 RBFOX2O43251 390 aaKnown RBP eCLIP8.44□□□□□ -1.06
TARDBP-221ENST00000619555 OR2J3O76001 311 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 ACTL6BO94805 426 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 EDN2P20800 178 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 KIR2DS2P43631 304 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 CATR1Q13166 79 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 KLF9Q13886 244 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-221ENST00000619555 CNPY1Q3B7I2 92 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 CD300EQ496F6 205 aaPredicted RBP8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SCGB2B2Q4G0G5 96 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SSX9Q7RTT3 188 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 TBC1D26Q86UD7 250 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 FAM223AQ8IWN6 122 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 MMD2Q8IY49 270 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SLC38A6Q8IZM9 456 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SPIN2AQ99865 258 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SPIN2BQ9BPZ2 258 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 PLEKHA3Q9HB20 300 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 SLC2A9Q9NRM0 540 aa8.44□□□□□ -1.06
TARDBP-221ENST00000619555 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 A0A1B0GW64 132 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 E7EUB6 86 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 KBTBD11O94819 623 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 IGKV1-39P01597 117 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 HLA-AP01891 365 aaKnown RBP8.43□□□□□ -1.06
TARDBP-221ENST00000619555 IGKV1D-39P04432 117 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 CD7P09564 240 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 MYOD1P15172 320 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 PGAM2P15259 253 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 F2RP25116 425 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 PTBP1P26599 531 aaKnown RBP eCLIP8.43□□□□□ -1.06
TARDBP-221ENST00000619555 CD81P60033 236 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 MEF2DQ14814 521 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 BAK1Q16611 211 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 C15orf32Q32M92 178 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 LINC00322Q6ZN03 302 aaPredicted RBP8.43□□□□□ -1.06
TARDBP-221ENST00000619555 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 NECAP1Q8NC96 275 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 OR51S1Q8NGJ8 323 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 OR2K2Q8NGT1 345 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 TERB2Q8NHR7 220 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 MARCH1Q8TCQ1 289 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 FAM110AQ9BQ89 295 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 DMRT1Q9Y5R6 373 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 SELENOKQ9Y6D0 94 aa8.43□□□□□ -1.06
TARDBP-221ENST00000619555 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 CREBL2O60519 120 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 OR2C1O95371 312 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 HPRT1P00492 218 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 IGHV3-23P01764 117 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 IL6RP08887 468 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 RPA2P15927 270 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 LPAR6P43657 344 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 PIGPP57054 158 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 RND3P61587 244 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 POU2AF1Q16633 256 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 DEFB114Q30KQ6 69 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 SPANXN2Q5MJ10 180 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 OR4A47Q6IF82 309 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 LPCAT3Q6P1A2 487 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 TMEM167AQ8TBQ9 72 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 BORCS5Q969J3 196 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 FYTTD1Q96QD9 318 aaKnown RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 OR2A7Q96R45 310 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
TARDBP-221ENST00000619555 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 HIPK2Q9H2X6 1198 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 PLEKHA2Q9HB19 425 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 HRASLSQ9HDD0 168 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 SLC2A8Q9NY64 477 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 FBXL7Q9UJT9 491 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 S4R3C0 116 aa8.42□□□□□ -1.06
TARDBP-221ENST00000619555 C2orf70A6NJV1 201 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 CGB1A6NKQ9 187 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 DISC1C4P0D8 188 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 NDUFB8O95169 186 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 HRASP01112 189 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 FOLR2P14207 255 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 G6PCP35575 357 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
TARDBP-221ENST00000619555 TAS2R31P59538 309 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 GUCA2BQ16661 112 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 SLC25A42Q86VD7 318 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 TOMM5Q8N4H5 51 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 ZNF486Q96H40 463 aaPredicted RBP8.41□□□□□ -1.06
TARDBP-221ENST00000619555 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 TP53RKQ96S44 253 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 TMEM140Q9NV12 185 aa8.41□□□□□ -1.06
TARDBP-221ENST00000619555 BET1LQ9NYM9 111 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms