RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ODAMA1E959 279 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 CKS2P33552 79 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RPL8P62917 257 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 UBE2L3P68036 154 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 FAM89BQ8N5H3 189 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SSC4DQ8WTU2 575 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RGPD3A6NKT7 1758 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 TRAV30A0A087WSZ9 112 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 TMPRSS2O15393 492 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SLC25A53Q5H9E4 307 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RPRMQ9NS64 109 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 DLL3Q9NYJ7 618 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SYNGR3O43761 229 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 C8orf88P0DMB2 117 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 KLK2P20151 261 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RNASE8Q8TDE3 154 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 ALKBH7Q9BT30 221 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 MRPL18Q9H0U6 180 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 MRPS18CQ9Y3D5 142 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 ARAP2Q8WZ64 1704 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 IGF2RP11717 2491 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 TRAV9-1A0A075B6T8 112 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 A0A1B0GW15 77 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RAMP1O60894 148 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 IGKV3-11P04433 115 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 ZNF665Q9H7R5 613 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 DDX60Q8IY21 1712 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 LINC00271P0C7V0 271 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 KIAA1644Q3SXP7 199 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 KMT2EQ8IZD2 1858 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SLC25A10Q9UBX3 287 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 SCN4AP35499 1836 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 APOBEC3AP31941 199 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 FAM166AQ6J272 317 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RSG1Q9BU20 258 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 PARLQ9H300 379 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 ZNF430Q9H8G1 570 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 UFC1Q9Y3C8 167 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 A0A1W2PP11 408 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 GZMBP10144 247 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 C1QL4Q86Z23 238 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 PHLDA1Q8WV24 401 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 SRXN1Q9BYN0 137 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 NUTF2P61970 127 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 CCDC144NLQ6NUI1 221 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 PCSK4Q6UW60 755 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 TCF23Q7RTU1 214 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 AURKAIP1Q9NWT8 199 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 H3BS24 57 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 IGHV3-13P01766 116 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 IGHV3-7P01780 117 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 GFRALQ6UXV0 394 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 C14orf144Q96I85 54 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 STRCQ7RTU9 1775 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 FBLL1A6NHQ2 334 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 CEACAM3P40198 252 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 UBE2E1P51965 193 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 DCAF10Q5QP82 559 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 MRPL52Q86TS9 123 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 STPG3Q8N7X2 389 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 OR8A1Q8NGG7 326 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 BAALCQ8WXS3 180 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 IGHV4-34P06331 123 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 METTL26Q96S19 204 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 KBTBD11-OT1A0A1B0GTJ5 212 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 MALP21145 153 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 LTBRP36941 435 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 SLC25A34Q6PIV7 304 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 ZNF441Q8N8Z8 693 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 MDFIQ99750 246 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 NDUFAF3Q9BU61 184 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 IZUMO1RA6ND01 250 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 KLK10O43240 276 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 QRFPP83859 136 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 GCSAMQ8N6F7 178 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 OR4C13Q8NGP0 309 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 IGKV3D-11A0A0A0MRZ8 115 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 LOC101059948A0A1B0GTJ6 334 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 A0A1W2PR77 199 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 CEACAM1P13688 526 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 PLA2G2AP14555 144 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 EGR4Q05215 589 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 RBPMS2Q6ZRY4 209 aaKnown RBP2.6□□□□□ -1.99
LPP-221ENST00000618621 FAM90A1Q86YD7 464 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 ABHD12Q8N2K0 398 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 HEPN1Q6WQI6 88 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 VCX2Q9H322 139 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 IL36RNQ9UBH0 155 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 CLDN16Q9Y5I7 305 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 A0A1W2PR80 420 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 CDKN1BP46527 198 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 ID3Q02535 119 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.6□□□□□ -1.99
LPP-221ENST00000618621 OR52E5Q8NH55 327 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 NPIPB3Q92617 1050 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 CCL13Q99616 98 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 TRBV24-1A0A075B6N3 115 aa2.6□□□□□ -1.99
LPP-221ENST00000618621 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms