RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RPEL1Q2QD12 228 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 CT45A1Q5HYN5 189 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 CT45A3Q8NHU0 189 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 FAM122AQ96E09 287 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 ENY2Q9NPA8 101 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 LY96Q9Y6Y9 160 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 V9GYV3 84 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 AHRRA9YTQ3 701 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 SNURFLB1AK76 121 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 IDI2-AS1Q9NZ38 188 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 CDX4O14627 284 aaPredicted RBP16.75■□□□□ 0.27
NEK3-208ENST00000618534 LINC00869P0C866 280 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 G0S2P27469 103 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 CENPWQ5EE01 88 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 ZNF705AQ6ZN79 300 aaPredicted RBP16.75■□□□□ 0.27
NEK3-208ENST00000618534 BAGE3Q86Y29 109 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 BAGE2Q86Y30 109 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 OR8I2Q8N0Y5 310 aa16.75■□□□□ 0.27
NEK3-208ENST00000618534 CACNA1GO43497 2377 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 PSG5Q15238 335 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 C17orf58Q2M2W7 97 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 ALKBH2Q6NS38 261 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 TEX43Q6ZNM6 134 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 MOGAT3Q86VF5 341 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 PARD6AQ9NPB6 346 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 AREGP15514 252 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 RAB7AP51149 207 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 RANP62826 216 aaKnown RBP16.74■□□□□ 0.27
NEK3-208ENST00000618534 MOB3BQ86TA1 216 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 NEUROG1Q92886 237 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 OR2V2Q96R30 315 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 LRFN3Q9BTN0 628 aa16.74■□□□□ 0.27
NEK3-208ENST00000618534 LOC400499M0QZD8 3231 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 CGB3P0DN86 165 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 CGB7P0DN87 165 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 CRYBB3P26998 211 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 FAM201AQ5SY85 155 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 ST6GALNAC3Q8NDV1 305 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 GUCD1Q96NT3 240 aa16.73■□□□□ 0.27
NEK3-208ENST00000618534 INTS1Q8N201 2190 aaKnown RBP16.73■□□□□ 0.27
NEK3-208ENST00000618534 GNG4P50150 75 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 OR5AU1Q8NGC0 362 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 SPINK4O60575 86 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 TNFSF13O75888 250 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 CCL11P51671 97 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 DOLPP1Q86YN1 238 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 NABP2Q9BQ15 211 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 SAMD10Q9BYL1 202 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 SLC45A2Q9UMX9 530 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 OR51B2Q9Y5P1 312 aa16.72■□□□□ 0.27
NEK3-208ENST00000618534 HELTA6NFD8 242 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 PRR33A8MZF0 331 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 CFHR2P36980 270 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 Q0VG73 95 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 DUX4L9Q6RFH8 374 aaPredicted RBP16.71■□□□□ 0.27
NEK3-208ENST00000618534 PQLC2Q6ZP29 291 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 LYG1Q8N1E2 194 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 VN1R17PQ8TDU5 208 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 SPENQ96T58 3664 aaKnown RBP16.71■□□□□ 0.27
NEK3-208ENST00000618534 C20orf144Q9BQM9 153 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 RNASE7Q9H1E1 156 aaKnown RBP16.71■□□□□ 0.27
NEK3-208ENST00000618534 PLSCR4Q9NRQ2 329 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 SLC25A10Q9UBX3 287 aaPredicted RBP16.71■□□□□ 0.27
NEK3-208ENST00000618534 PAM16Q9Y3D7 125 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 ZNF71Q9NQZ8 489 aaPredicted RBP16.71■□□□□ 0.27
NEK3-208ENST00000618534 RNF114Q9Y508 228 aa16.71■□□□□ 0.27
NEK3-208ENST00000618534 GATA2P23769 480 aaPredicted RBP16.7■□□□□ 0.26
NEK3-208ENST00000618534 CASP6P55212 293 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 MRPS11P82912 194 aaKnown RBP16.7■□□□□ 0.26
NEK3-208ENST00000618534 SRSF6Q13247 344 aaKnown RBP16.7■□□□□ 0.26
NEK3-208ENST00000618534 BHLHA15Q7RTS1 189 aaPredicted RBP16.7■□□□□ 0.26
NEK3-208ENST00000618534 FDCSPQ8NFU4 85 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 ZNF503Q96F45 646 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 GNB1LQ9BYB4 327 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 GNB4Q9HAV0 340 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 DSCAMO60469 2012 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 IGKV1OR2-108A0A075B7D4 117 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 ITGB1BP1O14713 200 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 FXYD3Q14802 87 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.7■□□□□ 0.26
NEK3-208ENST00000618534 SFXN3Q9BWM7 321 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 TMEM167BQ9NRX6 74 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 IL19Q9UHD0 177 aa16.7■□□□□ 0.26
NEK3-208ENST00000618534 TRBV9A0A0B4J1U6 114 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 KBTBD11-OT1A0A1B0GTJ5 212 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 NKX2-8O15522 239 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 SPRY3O43610 288 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 COMPP49747 757 aaPredicted RBP16.69■□□□□ 0.26
NEK3-208ENST00000618534 GNG10P50151 68 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 ZNF83P51522 516 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 TMEM183BQ1AE95 376 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 CORO2AQ92828 525 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 MIEN1Q9BRT3 115 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 ARL2-SNX15V9GYD0 113 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 DSCAML1Q8TD84 2053 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 CADP27708 2225 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 SLC35B1P78383 322 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 ITLN1Q8WWA0 313 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 PLEKHA3Q9HB20 300 aa16.69■□□□□ 0.26
NEK3-208ENST00000618534 NAT8BQ9UHF3 227 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms