RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 K7EP13 123 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 UNC119Q13432 240 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 UBE2WQ96B02 151 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 MS4A5Q9H3V2 200 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 LHX9Q9NQ69 397 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
COL5A1-208ENST00000618395 ARID2Q68CP9 1835 aa12.9□□□□□ -0.35
COL5A1-208ENST00000618395 SMIM20Q8N5G0 67 aa12.9□□□□□ -0.35
COL5A1-208ENST00000618395 DNAJC30Q96LL9 226 aa12.9□□□□□ -0.35
COL5A1-208ENST00000618395 KCNMB1Q16558 191 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 CCL2P13500 99 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
COL5A1-208ENST00000618395 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL5A1-208ENST00000618395 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 B5MCH6 92 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 TMEM126AQ9H061 195 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
COL5A1-208ENST00000618395 TPRX1Q8N7U7 411 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
COL5A1-208ENST00000618395 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-208ENST00000618395 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-208ENST00000618395 TRA2AQ13595 282 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL5A1-208ENST00000618395 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 DDB2Q92466 427 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 SPINT1O43278 529 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 CRPP02741 224 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-208ENST00000618395 SPEM1Q8N4L4 309 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 PPIHO43447 177 aaKnown RBP12.88□□□□□ -0.35
COL5A1-208ENST00000618395 FAM78AQ5JUQ0 283 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 FAM159AQ6UWV7 190 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 C8orf44Q96CB5 159 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
COL5A1-208ENST00000618395 LOXL2Q9Y4K0 774 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 EREGO14944 169 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 GATAD1Q8WUU5 269 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 ABHD17AQ96GS6 310 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 TMEM187Q14656 261 aa12.88□□□□□ -0.35
COL5A1-208ENST00000618395 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 PF4V1P10720 104 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 F2RL2O00254 374 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
COL5A1-208ENST00000618395 SCTP09683 121 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 CGAP01215 116 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 ZNF83P51522 516 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 C6orf106Q9H6K1 298 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-208ENST00000618395 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 NRAPQ86VF7 1730 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 A0A1W2PRE2 83 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 NAPSAO96009 420 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 CIARTQ8N365 385 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-208ENST00000618395 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 CXCL1P09341 107 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 ATP5L2Q7Z4Y8 100 aa12.87□□□□□ -0.35
COL5A1-208ENST00000618395 C9JAW5 83 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 PPBPP02775 128 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 ZNF793Q6ZN11 406 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 EAF1Q96JC9 268 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-208ENST00000618395 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 RALGAPA2Q2PPJ7 1873 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 EVI2AP22794 236 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 SNHG12Q9BXW3 62 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-208ENST00000618395 PLXNB2O15031 1838 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 IFI27P40305 119 aaPredicted RBP12.86□□□□□ -0.35
COL5A1-208ENST00000618395 FGF12P61328 243 aa12.86□□□□□ -0.35
COL5A1-208ENST00000618395 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 ZG16O60844 167 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 UCP1P25874 307 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 J3QT63 122 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 M0R381 172 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 TOMM40O96008 361 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 NDUFA2O43678 99 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 A0A1W2PQF6 199 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 CD5P06127 495 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 ZNF146Q15072 292 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
COL5A1-208ENST00000618395 ZNF658BQ4V348 819 aaPredicted RBP12.85□□□□□ -0.35
COL5A1-208ENST00000618395 PPP1R27Q86WC6 154 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms