RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	TMEM241	Q24JQ0	296 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CT45A1	Q5HYN5	189 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CT45A3	Q8NHU0	189 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SSMEM1	Q8WWF3	244 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GCM1	Q9NP62	436 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TIMM9	Q9Y5J7	89 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SAA2-SAA4	A0A096LPE2	208 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390		A6NNC1	897 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	YPEL1	O60688	119 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BK	O60814	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BJ	P06899	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	STAG3L2	P0CL84	134 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SAA2	P0DJI9	122 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BO	P23527	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BB	P33778	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MAS1L	P35410	378 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BD	P58876	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BC	P62807	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST2H2BE	Q16778	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C16orf82	Q7Z2V1	217 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	WFDC8	Q8IUA0	241 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C1orf87	Q8N0U7	546 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	OR51G1	Q8NGK1	321 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BH	Q93079	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	YPEL2	Q96QA6	119 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	P2RX4	Q99571	388 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BN	Q99877	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HIST1H2BM	Q99879	126 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	LPAR2	Q9HBW0	351 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390		A0A1W2PPV4	95 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C17orf112	F2Z3M2	114 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390		H0Y8G0	127 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MMP23A	O75900	390 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PNRC1	Q12796	327 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	DPF1	Q92782	380 aa		11.45	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PLXNB1	O43157	2135 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390		B4DEV8	164 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IGHV1-46	P01743	117 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NKX6-1	P78426	367 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C17orf58	Q2M2W7	97 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MIC13	Q5XKP0	118 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C1QL4	Q86Z23	238 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	FRZB	Q92765	325 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	RNF7	Q9UBF6	113 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TMPRSS2	O15393	492 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GNB2	P62879	340 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390		Q6ZS92	163 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TCTEX1D1	Q8N7M0	179 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	RND1	Q92730	232 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MS4A5	Q9H3V2	200 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NAT8	Q9UHE5	227 aa		11.44	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SPTA1	P02549	2419 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TRGV10	A0A0A0MS01	117 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C11orf94	C9JXX5	98 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TRGC1	P0CF51	173 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	RELB	Q01201	579 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	BSX	Q3C1V8	233 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	DNAJC4	Q9NNZ3	241 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	LHB	P01229	141 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ATP5G3	P48201	142 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	RPL23	P62829	140 aa	Known RBP	11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	ABHD5	Q8WTS1	349 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CITED1	Q99966	193 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TCF19	Q9Y242	345 aa		11.43	□□□□□ -0.58
CACNA1C-231	ENST00000616390	KBTBD11	O94819	623 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CD40	P25942	277 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TREML4	Q6UXN2	200 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CISD2	Q8N5K1	135 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	DERL1	Q9BUN8	251 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GAR1	Q9NY12	217 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IFITM10	A6NMD0	228 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	F2RL2	O00254	374 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	HOXA5	P20719	270 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	C1orf174	Q8IYL3	243 aa		11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TLN1	Q9Y490	2541 aa	Known RBP	11.42	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GFRA3	O60609	400 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	GGCT	O75223	188 aa	Known RBP	11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IRF2	P14316	349 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	OR4A47	Q6IF82	309 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	WDR83OS	Q9Y284	106 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	BRI3	O95415	125 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	SOD3	P08294	240 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TCF15	Q12870	199 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IGFL3	Q6UXB1	125 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390		Q8N7P7	452 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	FAM169B	Q8N8A8	192 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	OR10D4P	Q8NGN7	298 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	OR4S2	Q8NH73	311 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	TMEM170A	Q8WVE7	144 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	MGST2	Q99735	147 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	IGLV3-9	A0A075B6K5	115 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390		H7BYZ3	331 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	NPPC	P23582	126 aa		11.41	□□□□□ -0.58
CACNA1C-231	ENST00000616390	CFHR2	P36980	270 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms