RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 KRTAP10-3P60369 221 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 SPCS3P61009 180 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 RPP30P78346 268 aaKnown RBP8.64□□□□□ -1.03
COL4A1-205ENST00000615732 PRB3Q04118 309 aaPredicted RBP8.64□□□□□ -1.03
COL4A1-205ENST00000615732 PDPNQ86YL7 162 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 VKORC1L1Q8N0U8 176 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 HSD17B11Q8NBQ5 300 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 OR4F5Q8NH21 305 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 LHX4Q969G2 390 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 GINS3Q9BRX5 216 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
COL4A1-205ENST00000615732 DOCK11Q5JSL3 2073 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 CENPVL3A0A0U1RRI6 287 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 ANKRD34BA5PLL1 514 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 H0YJW9 148 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 M0R1W7 72 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 IGHV4-59P01825 116 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 POU2AF1Q16633 256 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 HLA-DRB5Q30154 266 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 SPINK9Q5DT21 86 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 OR4A47Q6IF82 309 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 Q6YL49 198 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 LY6G5BQ8NDX9 201 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 OR52E5Q8NH55 327 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 OSR1Q8TAX0 266 aaPredicted RBP8.63□□□□□ -1.03
COL4A1-205ENST00000615732 SCGB1C1Q8TD33 95 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 RHOVQ96L33 236 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 HARBI1Q96MB7 349 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 CITED1Q99966 193 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 NABP2Q9BQ15 211 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 HIPK2Q9H2X6 1198 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 PRNDQ9UKY0 176 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 WASHC3Q9Y3C0 194 aa8.63□□□□□ -1.03
COL4A1-205ENST00000615732 KMT2CQ8NEZ4 4911 aaKnown RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 IGHV1-69DA0A0B4J2H0 117 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 A0A0U1RQK1 487 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 I3L521 148 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 FGF16O43320 207 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 NDUFA7O95182 113 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 IGHV1-69P01742 117 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 FGF2P09038 288 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SEC11BP0C7V7 166 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SULT1A2P50226 295 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 ZNF137PP52743 207 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 DLX1P56177 255 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 RPS16P62249 146 aaKnown RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 BLOC1S1P78537 153 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SLC38A11Q08AI6 406 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 AANATQ16613 207 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 OR8G2PQ6IF36 304 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 C1QL4Q86Z23 238 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 STPG2Q8N412 459 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 PNKDQ8N490 385 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 BEND2Q8NDZ0 799 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SSMEM1Q8WWF3 244 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 RPEQ96AT9 228 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 FLYWCH2Q96CP2 140 aaKnown RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 GNPNAT1Q96EK6 184 aaPredicted RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SAT2Q96F10 170 aaPredicted RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 SIRPDQ9H106 197 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 PRDM13Q9H4Q3 707 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 FOXA2Q9Y261 457 aaPredicted RBP8.62□□□□□ -1.03
COL4A1-205ENST00000615732 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
COL4A1-205ENST00000615732 A0A1B0GUS0 222 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 A0A1W2PRD5 423 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 A0A1W2PRF3 423 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 A0A1W2PRM7 423 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 CLPSL1A2RUU4 121 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 UPK2O00526 184 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 TSPAN15O95858 294 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 PRH1P02810 166 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 ARG1P05089 322 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR8U8P0C7N1 319 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 SPP1P10451 314 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 MC5RP33032 325 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 CAMLGP49069 296 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 RAB5CP51148 216 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 ARF6P62330 175 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 ATP6V1FQ16864 119 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 VMA21Q3ZAQ7 101 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 AARDQ4LEZ3 155 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM177Q53S58 311 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM14EPQ6UXP3 125 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
COL4A1-205ENST00000615732 ZNF429Q86V71 674 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 C11orf42Q8N5U0 333 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR10P1Q8NGE3 313 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR5AN1Q8NGI8 311 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR4C13Q8NGP0 309 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR2G3Q8NGZ4 309 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 PINX1Q96BK5 328 aaKnown RBP8.61□□□□□ -1.03
COL4A1-205ENST00000615732 OR4C12Q96R67 309 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 HEYLQ9NQ87 328 aaPredicted RBP8.61□□□□□ -1.03
COL4A1-205ENST00000615732 FKBP11Q9NYL4 201 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 BET1LQ9NYM9 111 aa8.61□□□□□ -1.03
COL4A1-205ENST00000615732 TCF19Q9Y242 345 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms