RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 MUC21Q5SSG8 566 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 RNASE7Q9H1E1 156 aaKnown RBP11.78□□□□□ -0.52
CHD1-212ENST00000614616 DEFB127Q9H1M4 99 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 UBE2L6O14933 153 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 EGR1P18146 543 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 RABAC1Q9UI14 185 aa11.78□□□□□ -0.52
CHD1-212ENST00000614616 A0A087X0K7 114 aa11.77□□□□□ -0.52
CHD1-212ENST00000614616 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.52
CHD1-212ENST00000614616 UNC119Q13432 240 aa11.77□□□□□ -0.52
CHD1-212ENST00000614616 ASPHD2Q6ICH7 369 aa11.77□□□□□ -0.52
CHD1-212ENST00000614616 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.77□□□□□ -0.52
CHD1-212ENST00000614616 NABP2Q9BQ15 211 aa11.77□□□□□ -0.52
CHD1-212ENST00000614616 CCL20P78556 96 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 RSPO2Q6UXX9 243 aaPredicted RBP11.77□□□□□ -0.53
CHD1-212ENST00000614616 TM2D1Q9BX74 207 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
CHD1-212ENST00000614616 LIMS2Q7Z4I7 341 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 TGFAP01135 160 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 TIMP3P35625 211 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 HS3ST3B1Q9Y662 390 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 CGAP01215 116 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 LEPP41159 167 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 DEFB103AP81534 67 aa11.77□□□□□ -0.53
CHD1-212ENST00000614616 KLF4O43474 513 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 ZNF441Q8N8Z8 693 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 LRRC61Q9BV99 259 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 SARGQ9BW04 601 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 ZNF703Q9H7S9 590 aaPredicted RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 HBDP02042 147 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 OR10J6PQ8NGY7 276 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 SPTBN2O15020 2390 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 TRA2AQ13595 282 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■■□□□ 12.3
CHD1-212ENST00000614616 OR4A5Q8NH83 315 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 ELSPBP1Q96BH3 223 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 EPDR1Q9UM22 224 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 CSRP3P50461 194 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 GP6Q9HCN6 339 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 IGKCP01834 107 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 SRSF6Q13247 344 aaKnown RBP11.76□□□□□ -0.53
CHD1-212ENST00000614616 PCNX3Q9H6A9 2034 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 GFERP55789 205 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 C10orf91Q5T1B1 145 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 IFITM1P13164 125 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 LHX2P50458 406 aa11.76□□□□□ -0.53
CHD1-212ENST00000614616 F8W1H4 67 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 ATP5G3P48201 142 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 CX3CL1P78423 397 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 GPR82Q96P67 336 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 LINC00305Q7Z4B0 112 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 VN1R4Q7Z5H5 301 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 GREM1O60565 184 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 GPX1P07203 203 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 ADCYAP1P18509 176 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
CHD1-212ENST00000614616 MPV17L2Q567V2 206 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 C17orf99Q6UX52 265 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 GATAD1Q8WUU5 269 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 ID1P41134 155 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 TFF3Q07654 80 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 SHISA7A6NL88 538 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 BADQ92934 168 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 TMEM56-RWDD3S4R434 201 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 TNFSF14O43557 240 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 AZU1P20160 251 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 CXCL12P48061 93 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 H3BRM9 83 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 OR5AN1Q8NGI8 311 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 METTL26Q96S19 204 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
CHD1-212ENST00000614616 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 NGFRP08138 427 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 IGFBP6P24592 240 aaPredicted RBP11.74□□□□□ -0.53
CHD1-212ENST00000614616 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
CHD1-212ENST00000614616 MRPL27Q9P0M9 148 aaKnown RBP11.74□□□□□ -0.53
CHD1-212ENST00000614616 POU2F2P09086 479 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 PRSS12P56730 875 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 KHDC1LQ5JSQ8 128 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 GPHA2Q96T91 129 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 J3KRW8 73 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 APELAP0DMC3 54 aa11.73□□□□□ -0.53
CHD1-212ENST00000614616 ATXN8Q156A1 80 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms