RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 IGKV1D-17A0A075B6S4 117 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 GNG4P50150 75 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 LOXL3P58215 753 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 PSG5Q15238 335 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 SLC24A4Q8NFF2 622 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 FAM216AQ8WUB2 273 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 GNB1LQ9BYB4 327 aa12.44□□□□□ -0.42
PCDHGB1-202ENST00000611598 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PMCHP20382 165 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 AMTP48728 403 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PRR20EP86478 221 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PRR20CP86479 221 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PRR20DP86480 221 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PRR20BP86481 221 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 PRR20AP86496 221 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 GAGE1Q13065 139 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 HINT2Q9BX68 163 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 LY96Q9Y6Y9 160 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 GPR179Q6PRD1 2367 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 TRGV8A0A0C4DH27 118 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 HELTA6NFD8 242 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 MT-CO2P00403 227 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 LINC00869P0C866 280 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 GATA2P23769 480 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 NRN1Q9NPD7 142 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 ZNF586Q9NXT0 402 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 JPT1Q9UK76 154 aa12.43□□□□□ -0.42
PCDHGB1-202ENST00000611598 CX3CL1P78423 397 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 DDB2Q92466 427 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 A0A1W2PS18 150 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 IGKV3-15P01624 115 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 CECR9P0C854 216 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 CTRLP40313 264 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 MMDQ15546 238 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 TNCP24821 2201 aa12.42□□□□□ -0.42
PCDHGB1-202ENST00000611598 OR10J4P0C629 311 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 AREGP15514 252 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 ZNF83P51522 516 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 MRPS11P82912 194 aaKnown RBP12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 SPATA45Q537H7 98 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 TRAT1Q6PIZ9 186 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 IGKV1OR2-108A0A075B7D4 117 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 SRIP30626 198 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 SPRNQ5BIV9 151 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 Q6ZT83 130 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 C1orf174Q8IYL3 243 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 OR2Z1Q8NG97 314 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 RNF2Q99496 336 aa12.41□□□□□ -0.42
PCDHGB1-202ENST00000611598 BMPR1BO00238 502 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 LAMTOR5O43504 91 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 CD46P15529 392 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 RAB31Q13636 194 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 VWA1Q6PCB0 445 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 NABP2Q9BQ15 211 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 TMEM14BQ9NUH8 114 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 C21orf140B9A014 251 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 ZNF253O75346 499 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 HSPE1P61604 102 aaKnown RBP12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 FAM214BQ7L5A3 538 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 NHLRC2Q8NBF2 726 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 NEUROG1Q92886 237 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 TRIB1Q96RU8 372 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 GCM1Q9NP62 436 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 IL19Q9UHD0 177 aa12.4□□□□□ -0.42
PCDHGB1-202ENST00000611598 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 OR7C2O60412 319 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 IGLV2-8P01709 118 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 RAB7AP51149 207 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 SLC45A2Q9UMX9 530 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 MGST1P10620 155 aaKnown RBP12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 SFTPCP11686 197 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 HOXC12P31275 282 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 SUMO1P63165 101 aaKnown RBP12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 MLANAQ16655 118 aa12.39□□□□□ -0.43
PCDHGB1-202ENST00000611598 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms