RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 LAMTOR2Q9Y2Q5 125 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 MED31Q9Y3C7 131 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 ENPP4Q9Y6X5 453 aa2.29□□□□□ -2.04
SMCHD1-213ENST00000609587 THSD7AQ9UPZ6 1657 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 ABCC10Q5T3U5 1492 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 DISP2A7MBM2 1401 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 ATRNO75882 1429 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMED7-TICAM2A0A0A6YYA0 188 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 LOC389332A0A1B0GUA5 103 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 A0A1B0GW64 132 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 DUXBA0A1W2PPF3 345 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 C9JAW5 83 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 F6UZH7 168 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 H3BP45 60 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 K7EPK0 472 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 AIPO00170 330 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 PGLYRP1O75594 196 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 SCO1O75880 301 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 NDUFC2O95298 119 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 CDS2O95674 445 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 IGLV2-8P01709 118 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 HLA-DRB1P01911 266 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 HLA-DQB2P05538 268 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 P0DMU3 169 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM231AP0DMU4 169 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 FAM231CP0DMU5 169 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 GADD45AP24522 165 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 ZNF140P52738 457 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 CMC4P56277 68 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM69Q5SWH9 247 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 WDR59Q6PJI9 974 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 PRNTQ86SH4 94 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 PDZD9Q8IXQ8 264 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 YIPF7Q8N8F6 280 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 OR51T1Q8NGJ9 327 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 OR13C8Q8NGS7 320 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 OR51H1Q8NH63 302 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 LMX1AQ8TE12 382 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 ORAOV1Q8WV07 137 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 IGF2BP2-AS1Q96M15 143 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM70Q9BUB7 260 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 PBDC1Q9BVG4 233 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM147Q9BVK8 224 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM216Q9P0N5 145 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 GNG8Q9UK08 70 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 HIGD1AQ9Y241 93 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 PCYT1BQ9Y5K3 369 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 KMT2EQ8IZD2 1858 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 BRWD3Q6RI45 1802 aa2.28□□□□□ -2.04
SMCHD1-213ENST00000609587 ARAP3Q8WWN8 1544 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TCOF1Q13428 1488 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 MBD5Q9P267 1494 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TECPR2O15040 1411 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 IBTKQ9P2D0 1353 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TRBV19A0A075B6N1 114 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 OR4C45A6NMZ5 311 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 KNCNA6PVL3 124 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 F5H5P2 479 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 H7BYZ3 331 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 CCL25O15444 150 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 GNG7O60262 68 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 KCNK2O95069 426 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 IFNA17P01571 189 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 OPN1SWP03999 348 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 GYPCP04921 128 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 CTSEP14091 401 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 OPRM1P35372 400 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 HSPA9P38646 679 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ATP5G3P48201 142 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 PSMB2P49721 201 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 EMP1P54849 157 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TAS2R30P59541 319 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 PKIAP61925 76 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 CST6Q15828 149 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 SSX1Q16384 188 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TEX261Q6UWH6 196 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ACBD7Q8N6N7 88 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TMEM75Q8N9X5 138 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ARL11Q969Q4 196 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 HIST1H2BAQ96A08 127 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TMEM106AQ96A25 262 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 KLF6Q99612 283 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 PDCD10Q9BUL8 212 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 OR2H1Q9GZK4 316 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TMEM133Q9H2Q1 129 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 CST9LQ9H4G1 147 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 RNF122Q9H9V4 155 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 MRPL16Q9NX20 251 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TAAR3PQ9P1P4 343 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 LINC00527Q9UJ94 153 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 ANAPC10Q9UM13 185 aa2.27□□□□□ -2.05
SMCHD1-213ENST00000609587 TNFSF18Q9UNG2 199 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms