RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 NCOA1Q15788 1441 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 HIST3H3Q16695 136 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ACOT6Q3I5F7 207 aaPredicted RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 LIN52Q52LA3 116 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 C3orf33Q6P1S2 294 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 TNFAIP8L2Q6P589 184 aaPredicted RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ZNF550Q7Z398 422 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 TMED4Q7Z7H5 227 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 PHF13Q86YI8 300 aaPredicted RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 C1orf158Q8N1D5 194 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 NATD1Q8N6N6 113 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ANKRD31Q8N7Z5 1873 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ST6GALNAC3Q8NDV1 305 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 OR13D1Q8NGV5 346 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 RASSF5Q8WWW0 418 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 PYDC1Q8WXC3 89 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 SFRP2Q96HF1 295 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 OR7D2Q96RA2 312 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 MIEN1Q9BRT3 115 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 DDA1Q9BW61 102 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 EIF5A2Q9GZV4 153 aaKnown RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 RNASE7Q9H1E1 156 aaKnown RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ENY2Q9NPA8 101 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 BATF3Q9NR55 127 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 PARVAQ9NVD7 372 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 C14orf105Q9NVL8 296 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 GINS2Q9Y248 185 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ERGIC3Q9Y282 383 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 SLC35A3Q9Y2D2 325 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 POLR1DQ9Y2S0 133 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 UTP11Q9Y3A2 253 aaKnown RBP1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 HDGFL3Q9Y3E1 203 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 FAM215AQ9Y5M1 114 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 TMEM56-RWDD3S4R434 201 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 SPEF2Q9C093 1822 aa1.36□□□□□ -2.19
UBE2E3-212ENST00000602888 ARHGEF10O15013 1369 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 NUP210Q8TEM1 1887 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 SMARCA2P51531 1590 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 CD109Q6YHK3 1445 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 OR4C46A6NHA9 309 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 OR11H12B2RN74 326 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 EEF1E1-BLOC1S5C9J1V9 151 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 GPR31O00270 319 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 FAAHO00519 579 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 MFSD11O43934 449 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 NOS1APO75052 506 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 NAPSAO96009 420 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 IFNA21P01568 189 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 HBZP02008 142 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 ZNF728P0DKX0 622 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 MYL12AP19105 171 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 S100A7P31151 101 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 DAPP51397 102 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 DEFA3P59666 94 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 RAB4BP61018 213 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 BTN3A2P78410 334 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 ERHP84090 104 aaKnown RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 RELAQ04206 551 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 EMX1Q04741 257 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 TMEM267Q0VDI3 215 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 PMAIP1Q13794 54 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 POU6F1Q14863 301 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 JOSD1Q15040 202 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 CDK10Q15131 360 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 SPA17Q15506 151 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 CLEC12BQ2HXU8 276 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 ARHGAP11BQ3KRB8 267 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 PABPC1L2AQ5JQF8 200 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 C1orf194Q5T5A4 169 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 HIST2H3PS2Q5TEC6 136 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 LCN8Q6JVE9 175 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 LPCAT3Q6P1A2 487 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 AMTNQ6UX39 209 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 OR52L1Q8NGH7 329 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 OR11H2Q8NH07 326 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 CYGBQ8WWM9 190 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 NAA38Q9BRA0 125 aaKnown RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 FAM32AQ9Y421 112 aaKnown RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 LSM5Q9Y4Y9 91 aaKnown RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 FLG2Q5D862 2391 aaPredicted RBP1.35□□□□□ -2.19
UBE2E3-212ENST00000602888 ROBO3Q96MS0 1386 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 MIA2Q96PC5 1412 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 ECM29Q5VYK3 1845 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 DSCAMO60469 2012 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 TMED7-TICAM2A0A0A6YYA0 188 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 MDFIC2A0A1B0GVS7 189 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 BHLHE40O14503 412 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 IFNA1P01562 189 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 PPBPP02775 128 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 CRHP06850 196 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 IL3P08700 152 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 FGF6P10767 208 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 XCL1P47992 114 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 RPS20P60866 119 aaKnown RBP1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 SNAP25P60880 206 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 RPS24P62847 133 aaKnown RBP1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 HLA-DRB3P79483 266 aa1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 TFAMQ00059 246 aaKnown RBP1.34□□□□□ -2.19
UBE2E3-212ENST00000602888 ATP5L2Q7Z4Y8 100 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms